d1e0ca1

Domain	SCOPid	Range	SCOP Class	SCOP Fold	SCOP Superfamily	SCOP family	Protein
1e0c_A1	d1e0ca1	A1-A135	Alpha and beta proteins (a/b)	Rhodanese/Cell cycle control phosphatase	Rhodanese/Cell cycle control phosphatase	Sulfurtransferase (rhodanese)	Sulfurtransferase
1e0c_A2	d1e0ca2	A136-A271	Alpha and beta proteins (a/b)	Rhodanese/Cell cycle control phosphatase	Rhodanese/Cell cycle control phosphatase	Sulfurtransferase (rhodanese)	Sulfurtransferase

Alignment-based scores

Aligner	Aligned Length	Sequence Identity	RMSD	GDT-TS	COMPASS
manual	117	0.21368	1.52707	83.97436	19.94871
dali	119	0.21849	1.93168	79.83193	19.76807
tm	118	0.22034	1.57159	83.68644	19.97477
fast	111	0.22523	1.39567	85.13514	22.40385

In the alignments below, two upper-case letters are aligned, and two lower-case letters are NOT aligned. The superposition files are re-constructed from the corresponding alignments by minimizing the overall RMSD. In a PDB-format superposition file, the first domain is represented by chain S and the second domain is represented by chain A. The coordinates of the first domain are transformed, while the coordinates of the second domain are the same as in the original PDB file.

MANUAL alignment superposition in PDB format colored superposition in PyMol 1e0c_A1 ---mddfaslPLVIEPADLQARLSAPELILVDLTSAARYAE--------GHIPGARFVDPKRTQLGQPpaPGLQPPreQLESLFGELGHRPEAVYVVYDDeGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDR-PLSRelpapa 1e0c_A2 ggpvalslhdEPTASRDYLLGRLGAADLAIWDARSPQEYRGekvlaakgGHIPGAVNFEWTAAMDPSR--ALRIRT--DIAGRLEELGITPDKEIVTHCQ-THHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDtPVEL------

DALI alignment superposition in PDB format colored superposition in PyMol 1e0c_A1 ---mddfaSLPLVIEPADLQARLSAPELILVDLTSAARYAE--------GHIPGARFVDPKRTQLGQppAPGLQPPreQLESLFGELGHRPEAVYVVYDDeGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAE-DRPLSRelpapa 1e0c_A2 ggpvalslHDEPTASRDYLLGRLGAADLAIWDARSPQEYRGekvlaakgGHIPGAVNFEWTAAMDPS--RALRIRT--DIAGRLEELGITPDKEIVTHCQ-THHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHpDTPVEL------

TM alignment superposition in PDB format colored superposition in PyMol 1e0c_A1 ---------MDDFASLPLVIEPADLQARLSAPELILVDLTSAARYAE--------GHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAED-RPLSRELPAPA 1e0c_A2 GGPVALSLH------DEPTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPSR-AL-RIRT-D-IAGRLEELGITPDKEIVTHCQ-THHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVEL------

FAST alignment superposition in PDB format colored superposition in PyMol 1e0c_A1 MDDFASL----------PLVIEPADLQARLSAPELILVDLTSAARYAE---------GHIPGARFVDPKRTQLGQPPAP---GLQPPREQ-LESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAED-RPLSRELPAPA- 1e0c_A2 -------GGPVALSLHDEPTASRDYLLGRLGAADLAIWDARSPQEYR-GEKVLAAKGGHIPGAVNFEWTAAMDP-----SRALRIRT---DIAGRLEELGITPDKEIVTHCQ-THHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVE-------L