d1h0hb_d1hz6b_

Motif (click icon to enlarge)	SCOPid	Range	SCOP Class	SCOP Fold	SCOP Superfamily	SCOP Family	Protein
1h0h_Bh	d1h0hb_	B1-B14,B157-B214	Alpha and beta proteins (a+b)	Ferredoxin-like	4Fe-4S ferredoxins	Ferredoxin domains from multidomain proteins	Tungsten containing formate dehydrogenase, small subunit
1hz6_Bc	d1hz6b_	B2-B13,B14-B64	Alpha and beta proteins (a+b)	beta-Grasp (ubiquitin-like)	Immunoglobulin-binding domains	Immunoglobulin-binding domains	Immunoglobulin light chain-binding domain of protein L

Justification for analogy
The motif in 1h0h: hybrid, see the "structural drift" paper.

In the alignments below, two upper-case letters are aligned, while two lower-case letters are NOT aligned. The two sequences in an alignment are NOT continuous in most cases (see their ranges). The superpositions are re-constructed from the corresponding alignments by minimizing the overall RMSD. In a PDB-format superposition file, the first domain is represented by chain S and the second domain is represented by chain A.

MANUAL alignment     PDB format superposition    aligned motifs in PyMol   whole structures in PyMol

1h0h_Bh   --SKGFFVDTTrctac-ptgAMNFG--DLSEMEAMASARLAEIKAAYSdAKLCDpddVRVIFLTAhnpklyheyava
1hz6_Bc   eeVTIKANLIFa----ngstQTAEFkgTFEKATSEAYAYADTLKKDNGeWTVDVadkGYTLNIKFag----------

DALI alignment     PDB format superposition    aligned motifs in PyMol   whole structures in PyMol

1h0h_Bh   -SKGFFVDTTrctacptgAMNFGD-LSEMEAMASARLAEIKAAYSDAKLCDpdDVRVIFLTAHnpklyheyava
1hz6_Bc   eEVTIKANLI-fangstqTAEFKGtFEKATSEAYAYADTLKKDNGEWTVDVadKGYTLNIKFA----------g

TM alignment     PDB format superposition    aligned motifs in PyMol   whole structures in PyMol

1h0h_Bh   --SKGFFVDTT---RCTACPTGAMNFGD--L-SEME-AMASA-RLAE-IKAAYSDAKLCDP-DDVRVIFLTAH-NPKLYHEYAVA
1hz6_Bc   EEVTIKANLIFANGST------QTAEFKGTFEKA-TSEA-YAYA-DTLKKDNGE-WTVDVAD-KGYTLNIKFAG-----------

FAST alignment     PDB format superposition    aligned motifs in PyMol   whole structures in PyMol

1h0h_Bh   SKGFFVDTTRCTACPTGA-----------MNFGDLSEMEAMASARLAEIKAAYSDAKLCDPDD----VRVIFLTAHNPKLYHEYAVA--
1hz6_Bc   EEVTIKAN----------LIFANGSTQTAEFKGTFEKATSEAYAYADTLKKDNGEWTVD----VADKGYTLNIKF------------AG