1a35_A

PDB Headers (abridged)

HEADER    COMPLEX (ISOMERASE/DNA)                 29-JAN-98   1A35              
TITLE     HUMAN RECONSTITUTED DNA TOPOISOMERASE I IN NON-COVALENT               
TITLE    2 COMPLEX WITH A 22 BASE PAIR DNA DUPLEX                               
COMPND   2 MOLECULE: TOPOISOMERASE I;                                           
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    M.R.REDINBO,L.STEWART,P.KUHN,J.J.CHAMPOUX,W.G.J.HOL

Sequence

> 1a35_A (A:) TOPOISOMERASE I
IKWKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLSPKAEEVATFFAKMLDHEYTTKEIF
RKNFFKDWRKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEKL
LKEYGFCIMDNHKERIANFKIEPPGLFRGRGNHPKMGMLKRRIMPEDIIINCSKDAKVPS
PPPGHKWKEVRHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCV
DKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHINL
HPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGILN
KHLQDLMEGLTAKVFRTYNASITLQQQLKELTAPDENIPAKILSYNRANRAVAILCNHQR
AQIALGTSKLNFLDPRITVAWCKKWGVPIEKIYNKTQREKFAWAIDMADEDYEF

Coordinates

Link to SCOP

Link to Pfam

Link to Protein Data Bank

Structural Domains (with extensions added by structural compactness)

1a35_A_str_1 (A: 215-230, 320-430)

Sequence

> 1a35_A_str_1 (A: 215-230, 320-430) TOPOISOMERASE I
IKWKFLEHKGPVFAPPSKEEKLKIKEENEKLLKEYGFCIMDNHKERIANFKIEPPGLFRG
RGNHPKMGMLKRRIMPEDIIINCSKDAKVPSPPPGHKWKEVRHDNKVTWLVSWTENIQGS
IKYIMLN

Coordinates

1a35_A_str_2 (A: 231-319)

Sequence

> 1a35_A_str_2 (A: 231-319) TOPOISOMERASE I
YEPLPENVKFYYDGKVMKLSPKAEEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTNEE
KNIITNLSKCDFTQMSQYFKAQTEARKQM

Coordinates

1a35_A_str_3 (A: 431-452, 582-765)

Sequence

> 1a35_A_str_3 (A: 431-452, 582-765) TOPOISOMERASE I
PSSRIKGEKDWQKYETARRLKKEGLTAKVFRTYNASITLQQQLKELTAPDENIPAKILSY
NRANRAVAILCNHQRAQIALGTSKLNFLDPRITVAWCKKWGVPIEKIYNKTQREKFAWAI
DMADEDYEF

Coordinates

1a35_A_str_4 (A: 453-581)

Sequence

> 1a35_A_str_4 (A: 453-581) TOPOISOMERASE I
CVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHI
NLHPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGI
LNKHLQDLM

Coordinates

Structural Domains (with extensions added by sequence continuity)

1a35_A_seq_1 (A: 215-230, 320-430)

Sequence

> 1a35_A_seq_1 (A: 215-230, 320-430) TOPOISOMERASE I
IKWKFLEHKGPVFAPPSKEEKLKIKEENEKLLKEYGFCIMDNHKERIANFKIEPPGLFRG
RGNHPKMGMLKRRIMPEDIIINCSKDAKVPSPPPGHKWKEVRHDNKVTWLVSWTENIQGS
IKYIMLN

Coordinates

1a35_A_seq_2 (A: 231-319)

Sequence

> 1a35_A_seq_2 (A: 231-319) TOPOISOMERASE I
YEPLPENVKFYYDGKVMKLSPKAEEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTNEE
KNIITNLSKCDFTQMSQYFKAQTEARKQM

Coordinates

1a35_A_seq_3 (A: 431-452, 582-765)

Sequence

> 1a35_A_seq_3 (A: 431-452, 582-765) TOPOISOMERASE I
PSSRIKGEKDWQKYETARRLKKEGLTAKVFRTYNASITLQQQLKELTAPDENIPAKILSY
NRANRAVAILCNHQRAQIALGTSKLNFLDPRITVAWCKKWGVPIEKIYNKTQREKFAWAI
DMADEDYEF

Coordinates

1a35_A_seq_4 (A: 453-581)

Sequence

> 1a35_A_seq_4 (A: 453-581) TOPOISOMERASE I
CVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHI
NLHPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGI
LNKHLQDLM

Coordinates