1bgx_T
HEADER COMPLEX (POLYMERASE/INHIBITOR) 02-JUN-98 1BGX
TITLE TAQ POLYMERASE IN COMPLEX WITH TP7, AN INHIBITORY FAB
COMPND 2 MOLECULE: TAQ DNA POLYMERASE;
EXPDTA X-RAY DIFFRACTION
AUTHOR R.MURALI,D.J.SHARKEY,J.L.DAISS,H.M.KRISHNA MURTHY
> 1bgx_T (T:) TAQ DNA POLYMERASE
MRGMLPLFEPKGRVLLVDGHHLAYRTFHALKGLTTSRGEPVQAVYGFAKSLLKALKEDGD
AVIVVFDAKAPSFRHEAYGGYKAGRAPTPEDFPRQLALIKELVDLLGLARLEVPGYEADD
VLASLAKKAEKEGYEVRILTADKDLYQLLSDRIHVLHPEGYLITPAWLWEKYGLRPDQWA
DYRALTGDESDNLPGVKGIGEKTARKLLEEWGSLEALLKNLDRLKPAIREKILAHMDDLK
LSWDLAKVRTDLPLEVDFAKRREPDRERLRAFLERLEFGSLLHEFGLLESPKALEEAPWP
PPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLKEARGLLAKDLSVLA
LREGLGLPPGDDPMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERAALSERLFANLWGRL
EGEERLLWLYREVERPLSAVLAHMEATGVRLDVAYLRALSLEVAEEIARLEAEVFRLAGH
PFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAVLEALREAHPIVEKILQYRELTK
LKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFIA
EEGWLLVALDYSQIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRR
AAKTINFGVLYGMSAHRLSQELAIPYEEAQAFIERYFQSFPKVRAWIEKTLEEGRRRGYV
ETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRLEEMGARML
LQVHDELVLEAAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAKE
Structural Domains (with extensions added by structural compactness)
1bgx_T_str_1
(T: 1-180, 246-286)
> 1bgx_T_str_1 (T: 1-180, 246-286) TAQ DNA POLYMERASE
MRGMLPLFEPKGRVLLVDGHHLAYRTFHALKGLTTSRGEPVQAVYGFAKSLLKALKEDGD
AVIVVFDAKAPSFRHEAYGGYKAGRAPTPEDFPRQLALIKELVDLLGLARLEVPGYEADD
VLASLAKKAEKEGYEVRILTADKDLYQLLSDRIHVLHPEGYLITPAWLWEKYGLRPDQWA
AKVRTDLPLEVDFAKRREPDRERLRAFLERLEFGSLLHEFG
1bgx_T_str_2
(T: 181-245)
> 1bgx_T_str_2 (T: 181-245) TAQ DNA POLYMERASE
DYRALTGDESDNLPGVKGIGEKTARKLLEEWGSLEALLKNLDRLKPAIREKILAHMDDLK
LSWDL
1bgx_T_str_3
(T: 287-423)
> 1bgx_T_str_3 (T: 287-423) TAQ DNA POLYMERASE
LLESPKALEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLK
EARGLLAKDLSVLALREGLGLPPGDDPMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERA
ALSERLFANLWGRLEGE
1bgx_T_str_4
(T: 424-450, 559-583)
> 1bgx_T_str_4 (T: 424-450, 559-583) TAQ DNA POLYMERASE
ERLLWLYREVERPLSAVLAHMEATGVRRLHTRFNQTATATGRLSSSDPNLQN
1bgx_T_str_5
(T: 451-558)
> 1bgx_T_str_5 (T: 451-558) TAQ DNA POLYMERASE
LDVAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTG
KRSTSAAVLEALREAHPIVEKILQYRELTKLKSTYIDPLPDLIHPRTG
1bgx_T_str_6
(T: 584-614, 758-832)
> 1bgx_T_str_6 (T: 584-614, 758-832) TAQ DNA POLYMERASE
IPVRTPLGQRIRRAFIAEEGWLLVALDYSQIADLMKLAMVKLFPRLEEMGARMLLQVHDE
LVLEAAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAKE
1bgx_T_str_7
(T: 615-624, 706-757)
> 1bgx_T_str_7 (T: 615-624, 706-757) TAQ DNA POLYMERASE
ELRVLAHLSGWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQG
TA
1bgx_T_str_8
(T: 625-705)
> 1bgx_T_str_8 (T: 625-705) TAQ DNA POLYMERASE
DENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAAKTINFGVLYGMSAHRLSQELAI
PYEEAQAFIERYFQSFPKVRA
Structural Domains (with extensions added by sequence continuity)
1bgx_T_seq_1
(T: 1-180, 246-286)
> 1bgx_T_seq_1 (T: 1-180, 246-286) TAQ DNA POLYMERASE
MRGMLPLFEPKGRVLLVDGHHLAYRTFHALKGLTTSRGEPVQAVYGFAKSLLKALKEDGD
AVIVVFDAKAPSFRHEAYGGYKAGRAPTPEDFPRQLALIKELVDLLGLARLEVPGYEADD
VLASLAKKAEKEGYEVRILTADKDLYQLLSDRIHVLHPEGYLITPAWLWEKYGLRPDQWA
AKVRTDLPLEVDFAKRREPDRERLRAFLERLEFGSLLHEFG
1bgx_T_seq_2
(T: 181-245)
> 1bgx_T_seq_2 (T: 181-245) TAQ DNA POLYMERASE
DYRALTGDESDNLPGVKGIGEKTARKLLEEWGSLEALLKNLDRLKPAIREKILAHMDDLK
LSWDL
1bgx_T_seq_3
(T: 287-423)
> 1bgx_T_seq_3 (T: 287-423) TAQ DNA POLYMERASE
LLESPKALEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLK
EARGLLAKDLSVLALREGLGLPPGDDPMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERA
ALSERLFANLWGRLEGE
1bgx_T_seq_4
(T: 424-450, 559-583)
> 1bgx_T_seq_4 (T: 424-450, 559-583) TAQ DNA POLYMERASE
ERLLWLYREVERPLSAVLAHMEATGVRRLHTRFNQTATATGRLSSSDPNLQN
1bgx_T_seq_5
(T: 451-558)
> 1bgx_T_seq_5 (T: 451-558) TAQ DNA POLYMERASE
LDVAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTG
KRSTSAAVLEALREAHPIVEKILQYRELTKLKSTYIDPLPDLIHPRTG
1bgx_T_seq_6
(T: 584-614, 758-832)
> 1bgx_T_seq_6 (T: 584-614, 758-832) TAQ DNA POLYMERASE
IPVRTPLGQRIRRAFIAEEGWLLVALDYSQIADLMKLAMVKLFPRLEEMGARMLLQVHDE
LVLEAAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAKE
1bgx_T_seq_7
(T: 615-624, 706-757)
> 1bgx_T_seq_7 (T: 615-624, 706-757) TAQ DNA POLYMERASE
ELRVLAHLSGWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQG
TA
1bgx_T_seq_8
(T: 625-705)
> 1bgx_T_seq_8 (T: 625-705) TAQ DNA POLYMERASE
DENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAAKTINFGVLYGMSAHRLSQELAI
PYEEAQAFIERYFQSFPKVRA
Extensions (N/C terminal extensions and linkers)
1bgx_T_ext_1
(T: 248-286)
> 1bgx_T_ext_1 (T: 248-286) TAQ DNA POLYMERASE
VRTDLPLEVDFAKRREPDRERLRAFLERLEFGSLLHEFG