1bgx_T

PDB Headers (abridged)

HEADER    COMPLEX (POLYMERASE/INHIBITOR)          02-JUN-98   1BGX              
TITLE     TAQ POLYMERASE IN COMPLEX WITH TP7, AN INHIBITORY FAB                 
COMPND   2 MOLECULE: TAQ DNA POLYMERASE;                                        
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    R.MURALI,D.J.SHARKEY,J.L.DAISS,H.M.KRISHNA MURTHY                     

Sequence

> 1bgx_T (T:) TAQ DNA POLYMERASE
MRGMLPLFEPKGRVLLVDGHHLAYRTFHALKGLTTSRGEPVQAVYGFAKSLLKALKEDGD
AVIVVFDAKAPSFRHEAYGGYKAGRAPTPEDFPRQLALIKELVDLLGLARLEVPGYEADD
VLASLAKKAEKEGYEVRILTADKDLYQLLSDRIHVLHPEGYLITPAWLWEKYGLRPDQWA
DYRALTGDESDNLPGVKGIGEKTARKLLEEWGSLEALLKNLDRLKPAIREKILAHMDDLK
LSWDLAKVRTDLPLEVDFAKRREPDRERLRAFLERLEFGSLLHEFGLLESPKALEEAPWP
PPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLKEARGLLAKDLSVLA
LREGLGLPPGDDPMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERAALSERLFANLWGRL
EGEERLLWLYREVERPLSAVLAHMEATGVRLDVAYLRALSLEVAEEIARLEAEVFRLAGH
PFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAVLEALREAHPIVEKILQYRELTK
LKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFIA
EEGWLLVALDYSQIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRR
AAKTINFGVLYGMSAHRLSQELAIPYEEAQAFIERYFQSFPKVRAWIEKTLEEGRRRGYV
ETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRLEEMGARML
LQVHDELVLEAAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAKE

Coordinates

Link to SCOP

Link to Pfam

Link to Protein Data Bank

Structural Domains (with extensions added by structural compactness)

1bgx_T_str_1 (T: 1-180, 246-286)

Sequence

> 1bgx_T_str_1 (T: 1-180, 246-286) TAQ DNA POLYMERASE
MRGMLPLFEPKGRVLLVDGHHLAYRTFHALKGLTTSRGEPVQAVYGFAKSLLKALKEDGD
AVIVVFDAKAPSFRHEAYGGYKAGRAPTPEDFPRQLALIKELVDLLGLARLEVPGYEADD
VLASLAKKAEKEGYEVRILTADKDLYQLLSDRIHVLHPEGYLITPAWLWEKYGLRPDQWA
AKVRTDLPLEVDFAKRREPDRERLRAFLERLEFGSLLHEFG

Coordinates


1bgx_T_str_2 (T: 181-245)

Sequence

> 1bgx_T_str_2 (T: 181-245) TAQ DNA POLYMERASE
DYRALTGDESDNLPGVKGIGEKTARKLLEEWGSLEALLKNLDRLKPAIREKILAHMDDLK
LSWDL

Coordinates


1bgx_T_str_3 (T: 287-423)

Sequence

> 1bgx_T_str_3 (T: 287-423) TAQ DNA POLYMERASE
LLESPKALEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLK
EARGLLAKDLSVLALREGLGLPPGDDPMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERA
ALSERLFANLWGRLEGE

Coordinates


1bgx_T_str_4 (T: 424-450, 559-583)

Sequence

> 1bgx_T_str_4 (T: 424-450, 559-583) TAQ DNA POLYMERASE
ERLLWLYREVERPLSAVLAHMEATGVRRLHTRFNQTATATGRLSSSDPNLQN

Coordinates


1bgx_T_str_5 (T: 451-558)

Sequence

> 1bgx_T_str_5 (T: 451-558) TAQ DNA POLYMERASE
LDVAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTG
KRSTSAAVLEALREAHPIVEKILQYRELTKLKSTYIDPLPDLIHPRTG

Coordinates


1bgx_T_str_6 (T: 584-614, 758-832)

Sequence

> 1bgx_T_str_6 (T: 584-614, 758-832) TAQ DNA POLYMERASE
IPVRTPLGQRIRRAFIAEEGWLLVALDYSQIADLMKLAMVKLFPRLEEMGARMLLQVHDE
LVLEAAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAKE

Coordinates


1bgx_T_str_7 (T: 615-624, 706-757)

Sequence

> 1bgx_T_str_7 (T: 615-624, 706-757) TAQ DNA POLYMERASE
ELRVLAHLSGWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQG
TA

Coordinates


1bgx_T_str_8 (T: 625-705)

Sequence

> 1bgx_T_str_8 (T: 625-705) TAQ DNA POLYMERASE
DENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAAKTINFGVLYGMSAHRLSQELAI
PYEEAQAFIERYFQSFPKVRA

Coordinates

Structural Domains (with extensions added by sequence continuity)

1bgx_T_seq_1 (T: 1-180, 246-286)

Sequence

> 1bgx_T_seq_1 (T: 1-180, 246-286) TAQ DNA POLYMERASE
MRGMLPLFEPKGRVLLVDGHHLAYRTFHALKGLTTSRGEPVQAVYGFAKSLLKALKEDGD
AVIVVFDAKAPSFRHEAYGGYKAGRAPTPEDFPRQLALIKELVDLLGLARLEVPGYEADD
VLASLAKKAEKEGYEVRILTADKDLYQLLSDRIHVLHPEGYLITPAWLWEKYGLRPDQWA
AKVRTDLPLEVDFAKRREPDRERLRAFLERLEFGSLLHEFG

Coordinates


1bgx_T_seq_2 (T: 181-245)

Sequence

> 1bgx_T_seq_2 (T: 181-245) TAQ DNA POLYMERASE
DYRALTGDESDNLPGVKGIGEKTARKLLEEWGSLEALLKNLDRLKPAIREKILAHMDDLK
LSWDL

Coordinates


1bgx_T_seq_3 (T: 287-423)

Sequence

> 1bgx_T_seq_3 (T: 287-423) TAQ DNA POLYMERASE
LLESPKALEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLK
EARGLLAKDLSVLALREGLGLPPGDDPMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERA
ALSERLFANLWGRLEGE

Coordinates


1bgx_T_seq_4 (T: 424-450, 559-583)

Sequence

> 1bgx_T_seq_4 (T: 424-450, 559-583) TAQ DNA POLYMERASE
ERLLWLYREVERPLSAVLAHMEATGVRRLHTRFNQTATATGRLSSSDPNLQN

Coordinates


1bgx_T_seq_5 (T: 451-558)

Sequence

> 1bgx_T_seq_5 (T: 451-558) TAQ DNA POLYMERASE
LDVAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTG
KRSTSAAVLEALREAHPIVEKILQYRELTKLKSTYIDPLPDLIHPRTG

Coordinates


1bgx_T_seq_6 (T: 584-614, 758-832)

Sequence

> 1bgx_T_seq_6 (T: 584-614, 758-832) TAQ DNA POLYMERASE
IPVRTPLGQRIRRAFIAEEGWLLVALDYSQIADLMKLAMVKLFPRLEEMGARMLLQVHDE
LVLEAAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAKE

Coordinates


1bgx_T_seq_7 (T: 615-624, 706-757)

Sequence

> 1bgx_T_seq_7 (T: 615-624, 706-757) TAQ DNA POLYMERASE
ELRVLAHLSGWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQG
TA

Coordinates


1bgx_T_seq_8 (T: 625-705)

Sequence

> 1bgx_T_seq_8 (T: 625-705) TAQ DNA POLYMERASE
DENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAAKTINFGVLYGMSAHRLSQELAI
PYEEAQAFIERYFQSFPKVRA

Coordinates

Extensions (N/C terminal extensions and linkers)

1bgx_T_ext_1 (T: 248-286)

Sequence

> 1bgx_T_ext_1 (T: 248-286) TAQ DNA POLYMERASE
VRTDLPLEVDFAKRREPDRERLRAFLERLEFGSLLHEFG

Coordinates