1bjt_A

PDB Headers (abridged)

HEADER    TOPOISOMERASE                           29-JUN-98   1BJT              
TITLE     TOPOISOMERASE II RESIDUES 409 - 1201                                  
COMPND   2 MOLECULE: TOPOISOMERASE II;                                          
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    D.FASS,C.E.BOGDEN,J.M.BERGER

Sequence

> 1bjt_A (A:) TOPOISOMERASE II
RKSRITNYPKLEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKM
LNVREALKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTDSHIKGLIINFLESSFLG
LLDIQGFLLEFITPIIKVSITKPTKNTIAFYNMPDYEKWREEESHKFTWKQKYYKGLGTS
LAQEVREYFSNLDRHLKIFHSLQWLRQYEPFINKELILFSLADNIRSIPNVLDGFKPGQR
KVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPN
GAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEWYLPILPM
ILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEEIEPLRY
RMYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEEQHDDNIKFI
ITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNEILSEFYYVRLEY
YQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELENLGFPRFNKEG
KPYYGSPEELYGTYEYLLGMRIWSLTKERYQKLLKQKQEKETELENLLKLSAKDIWNTDL
KAFEVGYQEFLQRDAEARG

Coordinates

Link to SCOP

Link to Pfam

Link to Protein Data Bank

Structural Domains (with extensions added by structural compactness)

1bjt_A_str_1 (A: 419-561, 604-659)

Sequence

> 1bjt_A_str_1 (A: 419-561, 604-659) TOPOISOMERASE II
RKSRITNYPKLEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKM
LNVREALKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTDSHIKGLIINFLESSFLG
LLDIQGFLLEFITGLGTSLAQEVREYFSNLDRHLKIFHSLQWLRQYEP

Coordinates

1bjt_A_str_2 (A: 562-603)

Sequence

> 1bjt_A_str_2 (A: 562-603) TOPOISOMERASE II
PIIKVSITKPTKNTIAFYNMPDYEKWREEESHKFTWKQKYYK

Coordinates

1bjt_A_str_3 (A: 675-843)

Sequence

> 1bjt_A_str_3 (A: 675-843) TOPOISOMERASE II
FINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAY
HHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKI
FHPADDPLYKYIQEDEKTVEPEWYLPILPMILVNGAEGIGTGWSTYIPP

Coordinates

1bjt_A_str_4 (A: 844-866, 972-1006, 1151-1178)

Sequence

> 1bjt_A_str_4 (A: 844-866, 972-1006, 1151-1178) TOPOISOMERASE II
FNPLEIIKNIRHLMNDEELEQMHLMNMVAFDPHGKIKKYNSVNEILSEFYYVRLEYYQAK
DIWNTDLKAFEVGYQEFLQRDAEARG

Coordinates

1bjt_A_str_5 (A: 867-885, 969-971)

Sequence

> 1bjt_A_str_5 (A: 867-885, 969-971) TOPOISOMERASE II
PWFRGWTGTIEEIEPLRYRPIS

Coordinates

1bjt_A_str_6 (A: 886-968, 1007-1150)

Sequence

> 1bjt_A_str_6 (A: 886-968, 1007-1150) TOPOISOMERASE II
MYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEEQHDDNIKFII
TLSPEEMAKTRKIGFYERFKLISKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNK
PRNAIIQELENLGFPRFNKEGKPYYGSPEELYGTYEYLLGMRIWSLTKERYQKLLKQKQE
KETELENLLKLS

Coordinates

Structural Domains (with extensions added by sequence continuity)

1bjt_A_seq_1 (A: 419-561, 604-659)

Sequence

> 1bjt_A_seq_1 (A: 419-561, 604-659) TOPOISOMERASE II
RKSRITNYPKLEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKM
LNVREALKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTDSHIKGLIINFLESSFLG
LLDIQGFLLEFITGLGTSLAQEVREYFSNLDRHLKIFHSLQWLRQYEP

Coordinates

1bjt_A_seq_2 (A: 562-603)

Sequence

> 1bjt_A_seq_2 (A: 562-603) TOPOISOMERASE II
PIIKVSITKPTKNTIAFYNMPDYEKWREEESHKFTWKQKYYK

Coordinates

1bjt_A_seq_3 (A: 675-843)

Sequence

> 1bjt_A_seq_3 (A: 675-843) TOPOISOMERASE II
FINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAY
HHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKI
FHPADDPLYKYIQEDEKTVEPEWYLPILPMILVNGAEGIGTGWSTYIPP

Coordinates

1bjt_A_seq_4 (A: 844-866, 972-1006, 1151-1178)

Sequence

> 1bjt_A_seq_4 (A: 844-866, 972-1006, 1151-1178) TOPOISOMERASE II
FNPLEIIKNIRHLMNDEELEQMHLMNMVAFDPHGKIKKYNSVNEILSEFYYVRLEYYQAK
DIWNTDLKAFEVGYQEFLQRDAEARG

Coordinates

1bjt_A_seq_5 (A: 867-885, 969-971)

Sequence

> 1bjt_A_seq_5 (A: 867-885, 969-971) TOPOISOMERASE II
PWFRGWTGTIEEIEPLRYRPIS

Coordinates

1bjt_A_seq_6 (A: 886-968, 1007-1150)

Sequence

> 1bjt_A_seq_6 (A: 886-968, 1007-1150) TOPOISOMERASE II
MYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEEQHDDNIKFII
TLSPEEMAKTRKIGFYERFKLISKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNK
PRNAIIQELENLGFPRFNKEGKPYYGSPEELYGTYEYLLGMRIWSLTKERYQKLLKQKQE
KETELENLLKLS

Coordinates