1gku_B

PDB Headers (abridged)

HEADER    TOPOISOMERASE                           21-AUG-01   1GKU              
TITLE     REVERSE GYRASE FROM ARCHAEOGLOBUS FULGIDUS                            
COMPND   2 MOLECULE: REVERSE GYRASE;                                            
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    A.C.RODRIGUEZ,D.STOCK

Sequence

> 1gku_B (B:) REVERSE GYRASE
AAAAAAAAAAAAAAAAAAASLCLFPEDFLLKEFVEFFRKCVGEPRAIQKMWAKRILRKES
FAATAPTGVGKTSFGLAMSLFLALKGKRCYVIFPTSLLVIQAAETIRKYAEKAGVGTENL
IGYYHGRIPKREKENFMQNLRNFKIVITTTQFLSKHYRELGHFDFIFVDDVDAILKASKN
VDKLLHLLGFHYDLKTKSWVGEARGCLMVSTATAKKGKKAELFRQLLNFDIGSSRITVRN
VEDVAVNDESISTLSSILEKLGTGGIIYARTGEEAEEIYESLKNKFRIGIVTATKKGDYE
KFVEGEIDHLIGTAHRGLDLPERIRFAVFVGCPSFRVTIEDIDSLSPQMVKLLAYLYRNV
DEIERLLPAVERHIDEVREILKKVMGKERPQAKDVVVREGEVIFPDLRTYIQGSGRTSRL
FAGGLTKGASFLLEDDSELLSAFIERAKLYDIEFKSIDEVDFEKLSRELDESRDRYRRRQ
EFDLIKPALFIVESPTKARQISRFFGKPSVKVLDGAVVYEIPMQKYVLMVTASIGHVVDL
ITNRGFHGVLVNGRFVPVYASIKDNSRSRIEALRKLAHDAEFVIVGTDPDTEGEKIAWDL
KNLLSGCGAVKRAEFHEVTRRAILEALESLRDVDENLVKAQVVRRIEDRWIGFVLSQKLW
ERFNNRNLSAGRAQTLVLGWIIDRFQESRERRKIAIVRDFDLVLEHDEEEFDLTIKLVEE
REELRTPLPPYTTETMLSDANRILKFSVKQTMQIAQELFENGLITYHRTDSTRVSDVGQR
IAKEYLGDDFVGREWGESGAHECIRPTRPLTRDDVQRLIQEGVLVVEGLRWEHFALYDLI
FRRFMASQCRPFKVVVKKYSIEFDGKTAEEERIVRAEGRAYELYRAVWVKNELPTGTFRV
KAEVKSVPKVLPFTQSEIIQMMKERGIGRPSTYATIVDRLFMRNYVVEKYGRMIPTKLGI
DVFRFLVRRYAKFVSEDRTRDLESRMDAIERGELDYLKALEDMYAEIKSID

Coordinates

Link to SCOP

Link to Pfam

Link to Protein Data Bank

Structural Domains (with extensions added by structural compactness)

1gku_B_str_1 (B: 1-37)

Sequence

> 1gku_B_str_1 (B: 1-37) REVERSE GYRASE
AAAAAAAAAAAAAAAAAAASLCLF

Coordinates

1gku_B_str_2 (B: 38-247)

Sequence

> 1gku_B_str_2 (B: 38-247) REVERSE GYRASE
PEDFLLKEFVEFFRKCVGEPRAIQKMWAKRILRKESFAATAPTGVGKTSFGLAMSLFLAL
KGKRCYVIFPTSLLVIQAAETIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQNLRNFK
IVITTTQFLSKHYRELGHFDFIFVDDVDAILKASKNVDKLLHLLGFHYDLKTKSWVGEAR
GCLMVSTATAKKGKKAELFRQLLNFDIGSS

Coordinates

1gku_B_str_3 (B: 248-352, 425-503)

Sequence

> 1gku_B_str_3 (B: 248-352, 425-503) REVERSE GYRASE
RITVRNVEDVAVNDESISTLSSILEKLGTGGIIYARTGEEAEEIYESLKNKFRIGIVTAT
KKGDYEKFVEGEIDHLIGTAHRGLDLPERIRFAVFVGCPDLRTYIQGSGRTSRLFAGGLT
KGASFLLEDDSELLSAFIERAKLYDIEFKSIDEVDFEKLSRELDESRDRYRRRQEFDL

Coordinates

1gku_B_str_4 (B: 353-424)

Sequence

> 1gku_B_str_4 (B: 353-424) REVERSE GYRASE
SFRVTIEDIDSLSPQMVKLLAYLYRNVDEIERLLPAVERHIDEVREILKKVMGKERPQAK
DVVVREGEVIFP

Coordinates

1gku_B_str_5 (B: 504-678)

Sequence

> 1gku_B_str_5 (B: 504-678) REVERSE GYRASE
IKPALFIVESPTKARQISRFFGKPSVKVLDGAVVYEIPMQKYVLMVTASIGHVVDLITNR
GFHGVLVNGRFVPVYASIKDNSRSRIEALRKLAHDAEFVIVGTDPDTEGEKIAWDLKNLL
SGCGAVKRAEFHEVTRRAILEALESLRDVDE

Coordinates

1gku_B_str_6 (B: 679-713, 1009-1054)

Sequence

> 1gku_B_str_6 (B: 679-713, 1009-1054) REVERSE GYRASE
NLVKAQVVRRIEDRWIGFVLSQKLWERFNNRNLSALVRRYAKFVSEDRTRDLESRMDAIE
RGELDYLKALEDMYAEIKSID

Coordinates

1gku_B_str_7 (B: 714-734, 952-1008)

Sequence

> 1gku_B_str_7 (B: 714-734, 952-1008) REVERSE GYRASE
GRAQTLVLGWIIDRFQESRERKVLPFTQSEIIQMMKERGIGRPSTYATIVDRLFMRNYVV
EKYGRMIPTKLGIDVFRF

Coordinates

1gku_B_str_8 (B: 735-755, 941-951)

Sequence

> 1gku_B_str_8 (B: 735-755, 941-951) REVERSE GYRASE
RKIAIVRDFDLVLEHDEEEFDFRVKAEVKSVP

Coordinates

1gku_B_str_9 (B: 756-769, 894-940)

Sequence

> 1gku_B_str_9 (B: 756-769, 894-940) REVERSE GYRASE
LTIKLVEEREELRTPFKVVVKKYSIEFDGKTAEEERIVRAEGRAYELYRAVWVKNELPTG
T

Coordinates

1gku_B_str_10 (B: 770-893)

Sequence

> 1gku_B_str_10 (B: 770-893) REVERSE GYRASE
PLPPYTTETMLSDANRILKFSVKQTMQIAQELFENGLITYHRTDSTRVSDVGQRIAKEYL
GDDFVGREWGESGAHECIRPTRPLTRDDVQRLIQEGVLVVEGLRWEHFALYDLIFRRFMA
SQCR

Coordinates

Structural Domains (with extensions added by sequence continuity)

1gku_B_seq_1 (B: 1-37)

Sequence

> 1gku_B_seq_1 (B: 1-37) REVERSE GYRASE
AAAAAAAAAAAAAAAAAAASLCLF

Coordinates

1gku_B_seq_2 (B: 38-247)

Sequence

> 1gku_B_seq_2 (B: 38-247) REVERSE GYRASE
PEDFLLKEFVEFFRKCVGEPRAIQKMWAKRILRKESFAATAPTGVGKTSFGLAMSLFLAL
KGKRCYVIFPTSLLVIQAAETIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQNLRNFK
IVITTTQFLSKHYRELGHFDFIFVDDVDAILKASKNVDKLLHLLGFHYDLKTKSWVGEAR
GCLMVSTATAKKGKKAELFRQLLNFDIGSS

Coordinates

1gku_B_seq_3 (B: 248-352, 425-503)

Sequence

> 1gku_B_seq_3 (B: 248-352, 425-503) REVERSE GYRASE
RITVRNVEDVAVNDESISTLSSILEKLGTGGIIYARTGEEAEEIYESLKNKFRIGIVTAT
KKGDYEKFVEGEIDHLIGTAHRGLDLPERIRFAVFVGCPDLRTYIQGSGRTSRLFAGGLT
KGASFLLEDDSELLSAFIERAKLYDIEFKSIDEVDFEKLSRELDESRDRYRRRQEFDL

Coordinates

1gku_B_seq_4 (B: 353-424)

Sequence

> 1gku_B_seq_4 (B: 353-424) REVERSE GYRASE
SFRVTIEDIDSLSPQMVKLLAYLYRNVDEIERLLPAVERHIDEVREILKKVMGKERPQAK
DVVVREGEVIFP

Coordinates

1gku_B_seq_5 (B: 504-678)

Sequence

> 1gku_B_seq_5 (B: 504-678) REVERSE GYRASE
IKPALFIVESPTKARQISRFFGKPSVKVLDGAVVYEIPMQKYVLMVTASIGHVVDLITNR
GFHGVLVNGRFVPVYASIKDNSRSRIEALRKLAHDAEFVIVGTDPDTEGEKIAWDLKNLL
SGCGAVKRAEFHEVTRRAILEALESLRDVDE

Coordinates

1gku_B_seq_6 (B: 679-713, 1009-1054)

Sequence

> 1gku_B_seq_6 (B: 679-713, 1009-1054) REVERSE GYRASE
NLVKAQVVRRIEDRWIGFVLSQKLWERFNNRNLSALVRRYAKFVSEDRTRDLESRMDAIE
RGELDYLKALEDMYAEIKSID

Coordinates

1gku_B_seq_7 (B: 714-734, 952-1008)

Sequence

> 1gku_B_seq_7 (B: 714-734, 952-1008) REVERSE GYRASE
GRAQTLVLGWIIDRFQESRERKVLPFTQSEIIQMMKERGIGRPSTYATIVDRLFMRNYVV
EKYGRMIPTKLGIDVFRF

Coordinates

1gku_B_seq_8 (B: 735-755, 941-951)

Sequence

> 1gku_B_seq_8 (B: 735-755, 941-951) REVERSE GYRASE
RKIAIVRDFDLVLEHDEEEFDFRVKAEVKSVP

Coordinates

1gku_B_seq_9 (B: 756-769, 894-940)

Sequence

> 1gku_B_seq_9 (B: 756-769, 894-940) REVERSE GYRASE
LTIKLVEEREELRTPFKVVVKKYSIEFDGKTAEEERIVRAEGRAYELYRAVWVKNELPTG
T

Coordinates

1gku_B_seq_10 (B: 770-893)

Sequence

> 1gku_B_seq_10 (B: 770-893) REVERSE GYRASE
PLPPYTTETMLSDANRILKFSVKQTMQIAQELFENGLITYHRTDSTRVSDVGQRIAKEYL
GDDFVGREWGESGAHECIRPTRPLTRDDVQRLIQEGVLVVEGLRWEHFALYDLIFRRFMA
SQCR

Coordinates

Extensions (N/C terminal extensions and linkers)

1gku_B_ext_1 (B: 558-579)

Sequence

> 1gku_B_ext_1 (B: 558-579) REVERSE GYRASE
DLITNRGFHGVLVNGRFVPVYA

Coordinates

Composite domains

1gku_B_cm_1 (B: 1-37, 557-582)

Sequence

> 1gku_B_cm_1 (B: 1-37, 557-582) REVERSE GYRASE
AAAAAAAAAAAAAAAAAAASLCLFVDLITNRGFHGVLVNGRFVPVYASIK

Coordinates