1m1c_A

PDB Headers (abridged)

HEADER    VIRUS/VIRAL PROTEIN                     18-JUN-02   1M1C              
TITLE     STRUCTURE OF THE L-A VIRUS                                            
COMPND   2 MOLECULE: MAJOR COAT PROTEIN;                                        
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    H.NAITOW,J.TANG,M.CANADY,R.B.WICKNER,J.E.JOHNSON

Sequence

> 1m1c_A (A:) MAJOR COAT PROTEIN
MLRFVTKNSQDKSSDLFSICSDRGTFVAHNRVRTDFKFDNLVFNRVYGVSQKFTLVGNPT
VCFNEGSSYLEGIAKKYLTLDGGLAIDNVLNELRSTCGIPGNAVASHAYNITSWRWYDNH
VALLMNMLRAYHLQVLTEQGQYSAGDIPMYHDGHVKIKLPVTIDDTAGPTQFAWPSDRST
DSYPDWAQFSESFPSIDVPYLDVRPLTVTEVNFVLMMMSKWHRRTNLAIDYEAPQLADKF
AYRHALTVQDADEWIEGDRTDDQFRPPSSKVMLSALRKYVNHNRLYNQFYTAAQLLAQIM
MKPVPNCAEGYAWLMHDALVNIPKFGSIRGRYPFLLSGDAALIQATALEDWSAIMAKPEL
VFTYAMQVSVALNTGLYLRRVKKTGFGTTIDDSYEDGAFLQPETFVQAALACCTGQDAPL
NGMSDVYVTYPDLLEFDAVTQVPITVIEPAGYNIVDDHLVVVGVPVACSPYMIFPVAAFD
TANPYCGNFVIKAANKYLRKGAVYDKLEAWKLAWALRVAGYDTHFKVYGDTHGLTKFYAD
NGDTWTHIPEFVTDGDVMEVFVTAIERRARHFVELPRLNSPAFFRSVEVSTTIYDTHVQA
GAHAVYHASRINLDYVKPVSTGIQVINAGELKNYWGSVRRTQQGLGVVGLT

Coordinates

Link to SCOP

Link to Pfam

Link to Protein Data Bank

Structural Domains (with extensions added by structural compactness)

1m1c_A_str_1 (A: 1-51, 469-651)

Sequence

> 1m1c_A_str_1 (A: 1-51, 469-651) MAJOR COAT PROTEIN
MLRFVTKNSQDKSSDLFSICSDRGTFVAHNRVRTDFKFDNLVFNRVYGVSQSPYMIFPVA
AFDTANPYCGNFVIKAANKYLRKGAVYDKLEAWKLAWALRVAGYDTHFKVYGDTHGLTKF
YADNGDTWTHIPEFVTDGDVMEVFVTAIERRARHFVELPRLNSPAFFRSVEVSTTIYDTH
VQAGAHAVYHASRINLDYVKPVSTGIQVINAGELKNYWGSVRRTQQGLGVVGLT

Coordinates

1m1c_A_str_2 (A: 52-366)

Sequence

> 1m1c_A_str_2 (A: 52-366) MAJOR COAT PROTEIN
KFTLVGNPTVCFNEGSSYLEGIAKKYLTLDGGLAIDNVLNELRSTCGIPGNAVASHAYNI
TSWRWYDNHVALLMNMLRAYHLQVLTEQGQYSAGDIPMYHDGHVKIKLPVTIDDTAGPTQ
FAWPSDRSTDSYPDWAQFSESFPSIDVPYLDVRPLTVTEVNFVLMMMSKWHRRTNLAIDY
EAPQLADKFAYRHALTVQDADEWIEGDRTDDQFRPPSSKVMLSALRKYVNHNRLYNQFYT
AAQLLAQIMMKPVPNCAEGYAWLMHDALVNIPKFGSIRGRYPFLLSGDAALIQATALEDW
SAIMAKPELVFTYAM

Coordinates

1m1c_A_str_3 (A: 367-468)

Sequence

> 1m1c_A_str_3 (A: 367-468) MAJOR COAT PROTEIN
QVSVALNTGLYLRRVKKTGFGTTIDDSYEDGAFLQPETFVQAALACCTGQDAPLNGMSDV
YVTYPDLLEFDAVTQVPITVIEPAGYNIVDDHLVVVGVPVAC

Coordinates

Structural Domains (with extensions added by sequence continuity)

1m1c_A_seq_1 (A: 1-51, 469-651)

Sequence

> 1m1c_A_seq_1 (A: 1-51, 469-651) MAJOR COAT PROTEIN
MLRFVTKNSQDKSSDLFSICSDRGTFVAHNRVRTDFKFDNLVFNRVYGVSQSPYMIFPVA
AFDTANPYCGNFVIKAANKYLRKGAVYDKLEAWKLAWALRVAGYDTHFKVYGDTHGLTKF
YADNGDTWTHIPEFVTDGDVMEVFVTAIERRARHFVELPRLNSPAFFRSVEVSTTIYDTH
VQAGAHAVYHASRINLDYVKPVSTGIQVINAGELKNYWGSVRRTQQGLGVVGLT

Coordinates

1m1c_A_seq_2 (A: 52-366)

Sequence

> 1m1c_A_seq_2 (A: 52-366) MAJOR COAT PROTEIN
KFTLVGNPTVCFNEGSSYLEGIAKKYLTLDGGLAIDNVLNELRSTCGIPGNAVASHAYNI
TSWRWYDNHVALLMNMLRAYHLQVLTEQGQYSAGDIPMYHDGHVKIKLPVTIDDTAGPTQ
FAWPSDRSTDSYPDWAQFSESFPSIDVPYLDVRPLTVTEVNFVLMMMSKWHRRTNLAIDY
EAPQLADKFAYRHALTVQDADEWIEGDRTDDQFRPPSSKVMLSALRKYVNHNRLYNQFYT
AAQLLAQIMMKPVPNCAEGYAWLMHDALVNIPKFGSIRGRYPFLLSGDAALIQATALEDW
SAIMAKPELVFTYAM

Coordinates

1m1c_A_seq_3 (A: 367-468)

Sequence

> 1m1c_A_seq_3 (A: 367-468) MAJOR COAT PROTEIN
QVSVALNTGLYLRRVKKTGFGTTIDDSYEDGAFLQPETFVQAALACCTGQDAPLNGMSDV
YVTYPDLLEFDAVTQVPITVIEPAGYNIVDDHLVVVGVPVAC

Coordinates

Extensions (N/C terminal extensions and linkers)

1m1c_A_ext_1 (A: 612-651)

Sequence

> 1m1c_A_ext_1 (A: 612-651) MAJOR COAT PROTEIN
NLDYVKPVSTGIQVINAGELKNYWGSVRRTQQGLGVVGLT

Coordinates