1muk_A

PDB Headers (abridged)

HEADER    VIRUS/VIRAL PROTEIN                     24-SEP-02   1MUK              
TITLE     REOVIRUS LAMBDA3 NATIVE STRUCTURE                                     
COMPND   2 MOLECULE: MINOR CORE PROTEIN LAMBDA 3;                               
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    Y.TAO,D.L.FARSETTA,M.L.NIBERT,S.C.HARRISON

Sequence

> 1muk_A (A:) MINOR CORE PROTEIN LAMBDA 3
SSMILTQFGPFIESISGITDQSNDVFEDAAKAFSMFTRSDVYKALDEIPFSDDAMLPIPP
TIYTKPSHDSYYYIDALNRVRRKTYQGPDDVYVPNCSIVELLEPHETLTSYGRLSEAIEN
RAKDGDSQARIATTYGRIAESQARQIKAPLEKFVLALLVAEAGGSLYDPVLQKYDEIPDL
SHNCPLWCFREICRHISGPLPDRAPYLYLSAGVFWLMSPRMTSAIPPLLSDLVNLAILQQ
TAGLDPSLVKLGVQICLHAAASSSYSWFILKTKSIFPQNTLHSMYESLEGGYCPNLEWLE
PRSDYKFMYMGVMPLSAKYARSAPSNDKKARELGEKYGLSSVVGELRKRTKTYVKHDFAS
VRYIRDAMACTSGIFLVRTPTETVLQEYTQSPEIKVPIPQKDWTGPIGEIRILKDTTSSI
ARYLYRTWYLAAARMAAQPRTWDPLFQAIMRSQYVTARGGSGAALRESLYAINVSLPDFK
GLPVKAATKIFQAAQLANLPFSHTSVAILADTSMGLRNQVQRRPRSIMPLNVPQQQVSAP
HTLTADYINYHMNLSPTSGSAVIEKVIPLGVYASSPPNQSINIDISACDASITWDFFLSV
IMAAIHEGVASSSIGKPFMGVPASIVNDESVVGVRAARPISGMQNMIQHLSKLYKRGFSY
RVNDSFSPGNDFTHMTTTFPSGSTATSTEHTANNSTMMETFLTVWGPEHTDDPDVLRLMK
SLTIQRNYVCQGDDGLMIIDGTTAGKVNSETIQNDLELISKYGEEFGWKYDIAYDGTAEY
LKLYFIFGCRIPNLSRHPIVGKERANSSAEEPWPAILDQIMGVFFNGVHDGLQWQRWIRY
SWALCCAFSRQRTMIGESVGYLQYPMWSFVYWGLPLVKAFGSDPWIFSWYMPTGDLGMYS
WISLIRPLMTRWMVANGYVTDRCSTVFGNADYRRCFNELKLYQGYYMAQLPRNPKEVREQ
FTQALSDYLMQNPELKSRVLRGRSEWEKYGAGIIHNPPSLFDVPHKWYQGAQEAAIATRE
ELAEMDETLMRARRHSYSSFSKLLEAYLLVKWRMCEAREPSVDLRLPLCAGIDPLNSDPF
LKMVSVGPMLQSTRKYFAQTLFMAKTVSGLDVNAIDSALLRLRTLGADKKALTAQLLMVG
LQESEADALAGKIMLQDVNTVQLARVVNLAVPDTWMSLDFDSMFKHHVKLLPKDGRHLNT
DIPPRMGWLRAILRFLGAGMVMTATGVAVDIYLEDIHGGGRSLGQRFMTWMRQEGR

Coordinates

Link to SCOP

Link to Pfam

Link to Protein Data Bank

Structural Domains (with extensions added by structural compactness)

1muk_A_str_1 (A: 2-264)

Sequence

> 1muk_A_str_1 (A: 2-264) MINOR CORE PROTEIN LAMBDA 3
SSMILTQFGPFIESISGITDQSNDVFEDAAKAFSMFTRSDVYKALDEIPFSDDAMLPIPP
TIYTKPSHDSYYYIDALNRVRRKTYQGPDDVYVPNCSIVELLEPHETLTSYGRLSEAIEN
RAKDGDSQARIATTYGRIAESQARQIKAPLEKFVLALLVAEAGGSLYDPVLQKYDEIPDL
SHNCPLWCFREICRHISGPLPDRAPYLYLSAGVFWLMSPRMTSAIPPLLSDLVNLAILQQ
TAGLDPSLVKLGVQICLHAAASS

Coordinates

1muk_A_str_2 (A: 265-375)

Sequence

> 1muk_A_str_2 (A: 265-375) MINOR CORE PROTEIN LAMBDA 3
SYSWFILKTKSIFPQNTLHSMYESLEGGYCPNLEWLEPRSDYKFMYMGVMPLSAKYARSA
PSNDKKARELGEKYGLSSVVGELRKRTKTYVKHDFASVRYIRDAMACTSGI

Coordinates

1muk_A_str_3 (A: 376-553)

Sequence

> 1muk_A_str_3 (A: 376-553) MINOR CORE PROTEIN LAMBDA 3
FLVRTPTETVLQEYTQSPEIKVPIPQKDWTGPIGEIRILKDTTSSIARYLYRTWYLAAAR
MAAQPRTWDPLFQAIMRSQYVTARGGSGAALRESLYAINVSLPDFKGLPVKAATKIFQAA
QLANLPFSHTSVAILADTSMGLRNQVQRRPRSIMPLNVPQQQVSAPHTLTADYINYHM

Coordinates

1muk_A_str_4 (A: 554-589, 692-786)

Sequence

> 1muk_A_str_4 (A: 554-589, 692-786) MINOR CORE PROTEIN LAMBDA 3
NLSPTSGSAVIEKVIPLGVYASSPPNQSINIDISACTANNSTMMETFLTVWGPEHTDDPD
VLRLMKSLTIQRNYVCQGDDGLMIIDGTTAGKVNSETIQNDLELISKYGEEFGWKYDIAY
DGTAEYLKLYF

Coordinates

1muk_A_str_5 (A: 590-691)

Sequence

> 1muk_A_str_5 (A: 590-691) MINOR CORE PROTEIN LAMBDA 3
DASITWDFFLSVIMAAIHEGVASSSIGKPFMGVPASIVNDESVVGVRAARPISGMQNMIQ
HLSKLYKRGFSYRVNDSFSPGNDFTHMTTTFPSGSTATSTEH

Coordinates

1muk_A_str_6 (A: 787-875)

Sequence

> 1muk_A_str_6 (A: 787-875) MINOR CORE PROTEIN LAMBDA 3
IFGCRIPNLSRHPIVGKERANSSAEEPWPAILDQIMGVFFNGVHDGLQWQRWIRYSWALC
CAFSRQRTMIGESVGYLQYPMWSFVYWGL

Coordinates

1muk_A_str_7 (A: 876-956, 1026-1058)

Sequence

> 1muk_A_str_7 (A: 876-956, 1026-1058) MINOR CORE PROTEIN LAMBDA 3
PLVKAFGSDPWIFSWYMPTGDLGMYSWISLIRPLMTRWMVANGYVTDRCSTVFGNADYRR
CFNELKLYQGYYMAQLPRNPKATREELAEMDETLMRARRHSYSSFSKLLEAYLL

Coordinates

1muk_A_str_8 (A: 965-1025)

Sequence

> 1muk_A_str_8 (A: 965-1025) MINOR CORE PROTEIN LAMBDA 3
EVREQFTQALSDYLMQNPELKSRVLRGRSEWEKYGAGIIHNPPSLFDVPHKWYQGAQEAA
I

Coordinates

1muk_A_str_9 (A: 1059-1098, 1186-1265)

Sequence

> 1muk_A_str_9 (A: 1059-1098, 1186-1265) MINOR CORE PROTEIN LAMBDA 3
VKWRMCEAREPSVDLRLPLCAGIDPLNSDPFLKMVSVGPMSLDFDSMFKHHVKLLPKDGR
HLNTDIPPRMGWLRAILRFLGAGMVMTATGVAVDIYLEDIHGGGRSLGQRFMTWMRQEGR

Coordinates

1muk_A_str_10 (A: 1099-1185)

Sequence

> 1muk_A_str_10 (A: 1099-1185) MINOR CORE PROTEIN LAMBDA 3
LQSTRKYFAQTLFMAKTVSGLDVNAIDSALLRLRTLGADKKALTAQLLMVGLQESEADAL
AGKIMLQDVNTVQLARVVNLAVPDTWM

Coordinates

Structural Domains (with extensions added by sequence continuity)

1muk_A_seq_1 (A: 2-264)

Sequence

> 1muk_A_seq_1 (A: 2-264) MINOR CORE PROTEIN LAMBDA 3
SSMILTQFGPFIESISGITDQSNDVFEDAAKAFSMFTRSDVYKALDEIPFSDDAMLPIPP
TIYTKPSHDSYYYIDALNRVRRKTYQGPDDVYVPNCSIVELLEPHETLTSYGRLSEAIEN
RAKDGDSQARIATTYGRIAESQARQIKAPLEKFVLALLVAEAGGSLYDPVLQKYDEIPDL
SHNCPLWCFREICRHISGPLPDRAPYLYLSAGVFWLMSPRMTSAIPPLLSDLVNLAILQQ
TAGLDPSLVKLGVQICLHAAASS

Coordinates

1muk_A_seq_2 (A: 265-375)

Sequence

> 1muk_A_seq_2 (A: 265-375) MINOR CORE PROTEIN LAMBDA 3
SYSWFILKTKSIFPQNTLHSMYESLEGGYCPNLEWLEPRSDYKFMYMGVMPLSAKYARSA
PSNDKKARELGEKYGLSSVVGELRKRTKTYVKHDFASVRYIRDAMACTSGI

Coordinates

1muk_A_seq_3 (A: 376-553)

Sequence

> 1muk_A_seq_3 (A: 376-553) MINOR CORE PROTEIN LAMBDA 3
FLVRTPTETVLQEYTQSPEIKVPIPQKDWTGPIGEIRILKDTTSSIARYLYRTWYLAAAR
MAAQPRTWDPLFQAIMRSQYVTARGGSGAALRESLYAINVSLPDFKGLPVKAATKIFQAA
QLANLPFSHTSVAILADTSMGLRNQVQRRPRSIMPLNVPQQQVSAPHTLTADYINYHM

Coordinates

1muk_A_seq_4 (A: 554-589, 692-786)

Sequence

> 1muk_A_seq_4 (A: 554-589, 692-786) MINOR CORE PROTEIN LAMBDA 3
NLSPTSGSAVIEKVIPLGVYASSPPNQSINIDISACTANNSTMMETFLTVWGPEHTDDPD
VLRLMKSLTIQRNYVCQGDDGLMIIDGTTAGKVNSETIQNDLELISKYGEEFGWKYDIAY
DGTAEYLKLYF

Coordinates

1muk_A_seq_5 (A: 590-691)

Sequence

> 1muk_A_seq_5 (A: 590-691) MINOR CORE PROTEIN LAMBDA 3
DASITWDFFLSVIMAAIHEGVASSSIGKPFMGVPASIVNDESVVGVRAARPISGMQNMIQ
HLSKLYKRGFSYRVNDSFSPGNDFTHMTTTFPSGSTATSTEH

Coordinates

1muk_A_seq_6 (A: 787-875)

Sequence

> 1muk_A_seq_6 (A: 787-875) MINOR CORE PROTEIN LAMBDA 3
IFGCRIPNLSRHPIVGKERANSSAEEPWPAILDQIMGVFFNGVHDGLQWQRWIRYSWALC
CAFSRQRTMIGESVGYLQYPMWSFVYWGL

Coordinates

1muk_A_seq_7 (A: 876-956, 1026-1058)

Sequence

> 1muk_A_seq_7 (A: 876-956, 1026-1058) MINOR CORE PROTEIN LAMBDA 3
PLVKAFGSDPWIFSWYMPTGDLGMYSWISLIRPLMTRWMVANGYVTDRCSTVFGNADYRR
CFNELKLYQGYYMAQLPRNPKATREELAEMDETLMRARRHSYSSFSKLLEAYLL

Coordinates

1muk_A_seq_8 (A: 965-1025)

Sequence

> 1muk_A_seq_8 (A: 965-1025) MINOR CORE PROTEIN LAMBDA 3
EVREQFTQALSDYLMQNPELKSRVLRGRSEWEKYGAGIIHNPPSLFDVPHKWYQGAQEAA
I

Coordinates

1muk_A_seq_9 (A: 1059-1098, 1186-1265)

Sequence

> 1muk_A_seq_9 (A: 1059-1098, 1186-1265) MINOR CORE PROTEIN LAMBDA 3
VKWRMCEAREPSVDLRLPLCAGIDPLNSDPFLKMVSVGPMSLDFDSMFKHHVKLLPKDGR
HLNTDIPPRMGWLRAILRFLGAGMVMTATGVAVDIYLEDIHGGGRSLGQRFMTWMRQEGR

Coordinates

1muk_A_seq_10 (A: 1099-1185)

Sequence

> 1muk_A_seq_10 (A: 1099-1185) MINOR CORE PROTEIN LAMBDA 3
LQSTRKYFAQTLFMAKTVSGLDVNAIDSALLRLRTLGADKKALTAQLLMVGLQESEADAL
AGKIMLQDVNTVQLARVVNLAVPDTWM

Coordinates

Extensions (N/C terminal extensions and linkers)

1muk_A_ext_1 (A: 293-315)

Sequence

> 1muk_A_ext_1 (A: 293-315) MINOR CORE PROTEIN LAMBDA 3
YCPNLEWLEPRSDYKFMYMGVMP

Coordinates

Composite domains

1muk_A_cm_1 (A: 380-552, 590-691)

Sequence

> 1muk_A_cm_1 (A: 380-552, 590-691) MINOR CORE PROTEIN LAMBDA 3
TPTETVLQEYTQSPEIKVPIPQKDWTGPIGEIRILKDTTSSIARYLYRTWYLAAARMAAQ
PRTWDPLFQAIMRSQYVTARGGSGAALRESLYAINVSLPDFKGLPVKAATKIFQAAQLAN
LPFSHTSVAILADTSMGLRNQVQRRPRSIMPLNVPQQQVSAPHTLTADYINYHDASITWD
FFLSVIMAAIHEGVASSSIGKPFMGVPASIVNDESVVGVRAARPISGMQNMIQHLSKLYK
RGFSYRVNDSFSPGNDFTHMTTTFPSGSTATSTEH

Coordinates