1qme_A

PDB Headers (abridged)

HEADER    PEPTIDOGLYCAN SYNTHESIS                 28-SEP-99   1QME              
TITLE     PENICILLIN-BINDING PROTEIN 2X (PBP-2X)                                
COMPND   2 MOLECULE: PENICILLIN-BINDING PROTEIN 2X;                             
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    E.J.GORDON,N.MOUZ,E.DUEE,O.DIDEBERG

Sequence

> 1qme_A (A:) PENICILLIN-BINDING PROTEIN 2X
TVPAKRGTIYDRNGVPIAEDATSPNRSYPNGQFASSFIGLAQLHENEDGSKSLLGTSGME
SSLNSILAGTDGRTMDGKDVYTTISSPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEI
LATTQRPTFDADTKEGITEDFVWRDILYQSNYEPGSTMKVMMLAAAIDNNTFPGGEVFNS
SELKIADATIRDWDVNEGLTGGRMMTFSQGFAHSSNVGMTLLEQKMGDATWLDYLNRFKF
GVPTRFGLTDEYAGQLPADNIVNIAQSSFGQGISVTQTQMIRAFTAIANDGVMLEPKFIS
AIYDPNDQTARKSQKEIVGNPVSKDAASLTRTNMVLVGTDPVYGTMYNHSTGKPTVTVPG
QNVALKSGTAQIADEKNGGYLVGLTDYIFSAVSMSPAENPDFILYVTVQQPEHYSGIQLG
EFANPILERASAMKDSLNLQQSPYPMPSVKDISPGDLAEELRRNLVQPIVVGTGTKIKNS
SAEEGKNLAPNQQVLILSDKAEEVPDMYGWTKETAETLAKWLNIELEFQGSGSTVQKQDV
RANTAIKDIKKITLTLGD

Coordinates

Link to SCOP

Link to Pfam

Link to Protein Data Bank

Structural Domains (with extensions added by structural compactness)

1qme_A_str_1 (A: 71-263)

Sequence

> 1qme_A_str_1 (A: 71-263) PENICILLIN-BINDING PROTEIN 2X
TVPAKRGTIYDRNGVPIAEDATSPNRSYPNGQFASSFIGLAQLHENEDGSKSLLGTSGME
SSLNSILAGTDGRTMDGKDVYT

Coordinates

1qme_A_str_2 (A: 264-332, 457-516, 543-620)

Sequence

> 1qme_A_str_2 (A: 264-332, 457-516, 543-620) PENICILLIN-BINDING PROTEIN 2X
TISSPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDADTKEGITEDFV
WRDILYQSNTQTQMIRAFTAIANDGVMLEPKFISAIYDPNDQTARKSQKEIVGNPVSKDA
ASLTRTNMVNVALKSGTAQIADEKNGGYLVGLTDYIFSAVSMSPAENPDFILYVTVQQPE
HYSGIQLGEFANPILERASAMKDSLNL

Coordinates

1qme_A_str_3 (A: 333-456)

Sequence

> 1qme_A_str_3 (A: 333-456) PENICILLIN-BINDING PROTEIN 2X
YEPGSTMKVMMLAAAIDNNTFPGGEVFNSSELKIADATIRDWDVNEGLTGGRMMTFSQGF
AHSSNVGMTLLEQKMGDATWLDYLNRFKFGVPTRFGLTDEYAGQLPADNIVNIAQSSFGQ
GISV

Coordinates

1qme_A_str_4 (A: 517-542)

Sequence

> 1qme_A_str_4 (A: 517-542) PENICILLIN-BINDING PROTEIN 2X
LVGTDPVYGTMYNHSTGKPTVTVPGQ

Coordinates

1qme_A_str_5 (A: 632-693)

Sequence

> 1qme_A_str_5 (A: 632-693) PENICILLIN-BINDING PROTEIN 2X
QQSPYPMPSVKDISPGDLAEELRRNLVQPIVVGTGTKIKNSSAEEGKNLAPNQQVLILSD
KA

Coordinates

1qme_A_str_6 (A: 694-750)

Sequence

> 1qme_A_str_6 (A: 694-750) PENICILLIN-BINDING PROTEIN 2X
EEVPDMYGWTKETAETLAKWLNIELEFQGSGSTVQKQDVRANTAIKDIKKITLTLGD

Coordinates

Structural Domains (with extensions added by sequence continuity)

1qme_A_seq_1 (A: 71-263)

Sequence

> 1qme_A_seq_1 (A: 71-263) PENICILLIN-BINDING PROTEIN 2X
TVPAKRGTIYDRNGVPIAEDATSPNRSYPNGQFASSFIGLAQLHENEDGSKSLLGTSGME
SSLNSILAGTDGRTMDGKDVYT

Coordinates

1qme_A_seq_2 (A: 264-332, 457-516, 543-620)

Sequence

> 1qme_A_seq_2 (A: 264-332, 457-516, 543-620) PENICILLIN-BINDING PROTEIN 2X
TISSPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDADTKEGITEDFV
WRDILYQSNTQTQMIRAFTAIANDGVMLEPKFISAIYDPNDQTARKSQKEIVGNPVSKDA
ASLTRTNMVNVALKSGTAQIADEKNGGYLVGLTDYIFSAVSMSPAENPDFILYVTVQQPE
HYSGIQLGEFANPILERASAMKDSLNL

Coordinates

1qme_A_seq_3 (A: 333-456)

Sequence

> 1qme_A_seq_3 (A: 333-456) PENICILLIN-BINDING PROTEIN 2X
YEPGSTMKVMMLAAAIDNNTFPGGEVFNSSELKIADATIRDWDVNEGLTGGRMMTFSQGF
AHSSNVGMTLLEQKMGDATWLDYLNRFKFGVPTRFGLTDEYAGQLPADNIVNIAQSSFGQ
GISV

Coordinates

1qme_A_seq_4 (A: 517-542)

Sequence

> 1qme_A_seq_4 (A: 517-542) PENICILLIN-BINDING PROTEIN 2X
LVGTDPVYGTMYNHSTGKPTVTVPGQ

Coordinates

1qme_A_seq_5 (A: 632-693)

Sequence

> 1qme_A_seq_5 (A: 632-693) PENICILLIN-BINDING PROTEIN 2X
QQSPYPMPSVKDISPGDLAEELRRNLVQPIVVGTGTKIKNSSAEEGKNLAPNQQVLILSD
KA

Coordinates

1qme_A_seq_6 (A: 694-750)

Sequence

> 1qme_A_seq_6 (A: 694-750) PENICILLIN-BINDING PROTEIN 2X
EEVPDMYGWTKETAETLAKWLNIELEFQGSGSTVQKQDVRANTAIKDIKKITLTLGD

Coordinates

Extensions (N/C terminal extensions and linkers)

1qme_A_ext_1 (A: 306-326)

Sequence

> 1qme_A_ext_1 (A: 306-326) PENICILLIN-BINDING PROTEIN 2X
QRPTFDADTKEGITEDFVWRD

Coordinates

1qme_A_ext_2 (A: 423-435)

Sequence

> 1qme_A_ext_2 (A: 423-435) PENICILLIN-BINDING PROTEIN 2X
VPTRFGLTDEYAG

Coordinates

1qme_A_ext_3 (A: 480-494)

Sequence

> 1qme_A_ext_3 (A: 480-494) PENICILLIN-BINDING PROTEIN 2X
ISAIYDPNDQTARKS

Coordinates

Composite domains

1qme_A_cm_1 (A: 71-263, 306-326, 480-494)

Sequence

> 1qme_A_cm_1 (A: 71-263, 306-326, 480-494) PENICILLIN-BINDING PROTEIN 2X
TVPAKRGTIYDRNGVPIAEDATSPNRSYPNGQFASSFIGLAQLHENEDGSKSLLGTSGME
SSLNSILAGTDGRTMDGKDVYTQRPTFDADTKEGITEDFVWRDISAIYDPNDQTARKS

Coordinates

1qme_A_cm_2 (A: 264-305, 327-332, 423-435, 457-479, 495-516, 543-620)

Sequence

> 1qme_A_cm_2 (A: 264-305, 327-332, 423-435, 457-479, 495-516, 543-620) PENICILLIN-BINDING PROTEIN 2X
TISSPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTILYQSNVPTRFGLTDEYA
GTQTQMIRAFTAIANDGVMLEPKFQKEIVGNPVSKDAASLTRTNMVNVALKSGTAQIADE
KNGGYLVGLTDYIFSAVSMSPAENPDFILYVTVQQPEHYSGIQLGEFANPILERASAMKD
SLNL

Coordinates