1t3n_A

PDB Headers (abridged)

HEADER    REPLICATION/DNA                         27-APR-04   1T3N              
TITLE     STRUCTURE OF THE CATALYTIC CORE OF DNA POLYMERASE IOTA IN             
TITLE    2 COMPLEX WITH DNA AND DTTP                                            
COMPND   2 MOLECULE: POLYMERASE (DNA DIRECTED) IOTA;                            
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    D.T.NAIR,R.E.JOHNSON,S.PRAKASH,L.PRAKASH,A.K.AGGARWAL

Sequence

> 1t3n_A (A:) POLYMERASE (DNA DIRECTED) IOTA
SRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKE
KCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSD
ELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLA
KLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTFSP
KILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLA
SLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDI
LMKLFRNMVNVKMPFHLTLLSVCFCNLK

Coordinates

Link to SCOP

Link to Pfam

Link to Protein Data Bank

Structural Domains (with extensions added by structural compactness)

1t3n_A_str_1 (A: 27-38, 103-224)

Sequence

> 1t3n_A_str_1 (A: 27-38, 103-224) POLYMERASE (DNA DIRECTED) IOTA
SRVIVHVDLDCFREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSA
VTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVS
GVFKPNQQTVLLPE

Coordinates

1t3n_A_str_2 (A: 39-102)

Sequence

> 1t3n_A_str_2 (A: 39-102) POLYMERASE (DNA DIRECTED) IOTA
YAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGED
LTRY

Coordinates

1t3n_A_str_3 (A: 225-293)

Sequence

> 1t3n_A_str_3 (A: 225-293) POLYMERASE (DNA DIRECTED) IOTA
SCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKL
SFGEDNSPV

Coordinates

1t3n_A_str_4 (A: 294-414)

Sequence

> 1t3n_A_str_4 (A: 294-414) POLYMERASE (DNA DIRECTED) IOTA
ILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTVRLIIRRYSSEK
HYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNL
K

Coordinates

Structural Domains (with extensions added by sequence continuity)

1t3n_A_seq_1 (A: 27-38, 103-224)

Sequence

> 1t3n_A_seq_1 (A: 27-38, 103-224) POLYMERASE (DNA DIRECTED) IOTA
SRVIVHVDLDCFREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSA
VTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVS
GVFKPNQQTVLLPE

Coordinates

1t3n_A_seq_2 (A: 39-102)

Sequence

> 1t3n_A_seq_2 (A: 39-102) POLYMERASE (DNA DIRECTED) IOTA
YAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGED
LTRY

Coordinates

1t3n_A_seq_3 (A: 225-293)

Sequence

> 1t3n_A_seq_3 (A: 225-293) POLYMERASE (DNA DIRECTED) IOTA
SCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKL
SFGEDNSPV

Coordinates

1t3n_A_seq_4 (A: 294-414)

Sequence

> 1t3n_A_seq_4 (A: 294-414) POLYMERASE (DNA DIRECTED) IOTA
ILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTVRLIIRRYSSEK
HYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNL
K

Coordinates