1tgo_A

PDB Headers (abridged)

HEADER    TRANSFERASE                             23-FEB-99   1TGO              
TITLE     THERMOSTABLE B TYPE DNA POLYMERASE FROM THERMOCOCCUS                  
TITLE    2 GORGONARIUS                                                          
COMPND   2 MOLECULE: THERMOSTABLE B DNA POLYMERASE;                             
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    K.-P.HOPFNER,A.EICHINGER,R.A.ENGH,F.LAUE,W.ANKENBAUER,                
AUTHOR   2 R.HUBER,B.ANGERER

Sequence

> 1tgo_A (A:) THERMOSTABLE B DNA POLYMERASE
MILDTDYITEDGKPVIRIFKKENGEFKIDYDRNFEPYIYALLKDDSAIEDVKKITAERHG
TTVRVVRAEKVKKKFLGRPIEVWKLYFTHPQDVPAIRDKIKEHPAVVDIYEYDIPFAKRY
LIDKGLIPMEGDEELKMLAFDIETLYHEGEEFAEGPILMISYADEEGARVITWKNIDLPY
VDVVSTEKEMIKRFLKVVKEKDPDVLITYNGDNFDFAYLKKRSEKLGVKFILGREGSEPK
IQRMGDRFAVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAIFGQPKEKVYAEEIAQAWE
TGEGLERVARYSMEDAKVTYELGKEFFPMEAQLSRLVGQSLWDVSRSSTGNLVEWFLLRK
AYERNELAPNKPDERELARRRESYAGGYVKEPERGLWENIVYLDFRSLYPSIIITHNVSP
DTLNREGCEEYDVAPQVGHKFCKDFPGFIPSLLGDLLEERQKVKKKMKATIDPIEKKLLD
YRQRAIKILANSFYGYYGYAKARWYCKECAESVTAWGRQYIETTIREIEEKFGFKVLYAD
TDGFFATIPGADAETVKKKAKEFLDYINAKLPGLLELEYEGFYKRGFFVTKKKYAVIDEE
DKITTRGLEIVRRDWSEIAKETQARVLEAILKHGDVEEAVRIVKEVTEKLSKYEVPPEKL
VIYEQITRDLKDYKATGPHVAVAKRLAARGIKIRPGTVISYIVLKGSGRIGDRAIPFDEF
DPAKHKYDAEYYIENQVLPAVERILRAFGYRKEDLRYQKTRQVGLGAWLKPKT

Coordinates

Link to SCOP

Link to Pfam

Link to Protein Data Bank

Structural Domains (with extensions added by structural compactness)

1tgo_A_str_1 (A: 1-34, 116-135)

Sequence

> 1tgo_A_str_1 (A: 1-34, 116-135) THERMOSTABLE B DNA POLYMERASE
MILDTDYITEDGKPVIRIFKKENGEFKIDYDRNFFAKRYLIDKGLIPMEGDEEL

Coordinates

1tgo_A_str_2 (A: 35-115)

Sequence

> 1tgo_A_str_2 (A: 35-115) THERMOSTABLE B DNA POLYMERASE
EPYIYALLKDDSAIEDVKKITAERHGTTVRVVRAEKVKKKFLGRPIEVWKLYFTHPQDVP
AIRDKIKEHPAVVDIYEYDIP

Coordinates

1tgo_A_str_3 (A: 136-327)

Sequence

> 1tgo_A_str_3 (A: 136-327) THERMOSTABLE B DNA POLYMERASE
KMLAFDIETLYHEGEEFAEGPILMISYADEEGARVITWKNIDLPYVDVVSTEKEMIKRFL
KVVKEKDPDVLITYNGDNFDFAYLKKRSEKLGVKFILGREGSEPKIQRMGDRFAVEVKGR
IHFDLYPVIRRTINLPTYTLEAVYEAIFGQPKEKVYAEEIAQAWETGEGLERVARYSMED
AKVTYELGKEFF

Coordinates

1tgo_A_str_4 (A: 328-386)

Sequence

> 1tgo_A_str_4 (A: 328-386) THERMOSTABLE B DNA POLYMERASE
PMEAQLSRLVGQSLWDVSRSSTGNLVEWFLLRKAYERNELAPNKPDERELARRRESYAG

Coordinates

1tgo_A_str_5 (A: 387-408, 518-596)

Sequence

> 1tgo_A_str_5 (A: 387-408, 518-596) THERMOSTABLE B DNA POLYMERASE
GYVKEPERGLWENIVYLDFRSLRQYIETTIREIEEKFGFKVLYADTDGFFATIPGADAET
VKKKAKEFLDYINAKLPGLLELEYEGFYKRGFFVTKKKYAV

Coordinates

1tgo_A_str_6 (A: 409-517)

Sequence

> 1tgo_A_str_6 (A: 409-517) THERMOSTABLE B DNA POLYMERASE
YPSIIITHNVSPDTLNREGCEEYDVAPQVGHKFCKDFPGFIPSLLGDLLEERQKVKKKMK
ATIDPIEKKLLDYRQRAIKILANSFYGYYGYAKARWYCKECAESVTAWG

Coordinates

1tgo_A_str_7 (A: 597-652, 729-773)

Sequence

> 1tgo_A_str_7 (A: 597-652, 729-773) THERMOSTABLE B DNA POLYMERASE
IDEEDKITTRGLEIVRRDWSEIAKETQARVLEAILKHGDVEEAVRIVKEVTEKLSKAEYY
IENQVLPAVERILRAFGYRKEDLRYQKTRQVGLGAWLKPKT

Coordinates

1tgo_A_str_8 (A: 653-728)

Sequence

> 1tgo_A_str_8 (A: 653-728) THERMOSTABLE B DNA POLYMERASE
YEVPPEKLVIYEQITRDLKDYKATGPHVAVAKRLAARGIKIRPGTVISYIVLKGSGRIGD
RAIPFDEFDPAKHKYD

Coordinates

Structural Domains (with extensions added by sequence continuity)

1tgo_A_seq_1 (A: 1-34, 116-135)

Sequence

> 1tgo_A_seq_1 (A: 1-34, 116-135) THERMOSTABLE B DNA POLYMERASE
MILDTDYITEDGKPVIRIFKKENGEFKIDYDRNFFAKRYLIDKGLIPMEGDEEL

Coordinates

1tgo_A_seq_2 (A: 35-115)

Sequence

> 1tgo_A_seq_2 (A: 35-115) THERMOSTABLE B DNA POLYMERASE
EPYIYALLKDDSAIEDVKKITAERHGTTVRVVRAEKVKKKFLGRPIEVWKLYFTHPQDVP
AIRDKIKEHPAVVDIYEYDIP

Coordinates

1tgo_A_seq_3 (A: 136-327)

Sequence

> 1tgo_A_seq_3 (A: 136-327) THERMOSTABLE B DNA POLYMERASE
KMLAFDIETLYHEGEEFAEGPILMISYADEEGARVITWKNIDLPYVDVVSTEKEMIKRFL
KVVKEKDPDVLITYNGDNFDFAYLKKRSEKLGVKFILGREGSEPKIQRMGDRFAVEVKGR
IHFDLYPVIRRTINLPTYTLEAVYEAIFGQPKEKVYAEEIAQAWETGEGLERVARYSMED
AKVTYELGKEFF

Coordinates

1tgo_A_seq_4 (A: 328-386)

Sequence

> 1tgo_A_seq_4 (A: 328-386) THERMOSTABLE B DNA POLYMERASE
PMEAQLSRLVGQSLWDVSRSSTGNLVEWFLLRKAYERNELAPNKPDERELARRRESYAG

Coordinates

1tgo_A_seq_5 (A: 387-408, 518-596)

Sequence

> 1tgo_A_seq_5 (A: 387-408, 518-596) THERMOSTABLE B DNA POLYMERASE
GYVKEPERGLWENIVYLDFRSLRQYIETTIREIEEKFGFKVLYADTDGFFATIPGADAET
VKKKAKEFLDYINAKLPGLLELEYEGFYKRGFFVTKKKYAV

Coordinates

1tgo_A_seq_6 (A: 409-517)

Sequence

> 1tgo_A_seq_6 (A: 409-517) THERMOSTABLE B DNA POLYMERASE
YPSIIITHNVSPDTLNREGCEEYDVAPQVGHKFCKDFPGFIPSLLGDLLEERQKVKKKMK
ATIDPIEKKLLDYRQRAIKILANSFYGYYGYAKARWYCKECAESVTAWG

Coordinates

1tgo_A_seq_7 (A: 597-652, 729-773)

Sequence

> 1tgo_A_seq_7 (A: 597-652, 729-773) THERMOSTABLE B DNA POLYMERASE
IDEEDKITTRGLEIVRRDWSEIAKETQARVLEAILKHGDVEEAVRIVKEVTEKLSKAEYY
IENQVLPAVERILRAFGYRKEDLRYQKTRQVGLGAWLKPKT

Coordinates

1tgo_A_seq_8 (A: 653-728)

Sequence

> 1tgo_A_seq_8 (A: 653-728) THERMOSTABLE B DNA POLYMERASE
YEVPPEKLVIYEQITRDLKDYKATGPHVAVAKRLAARGIKIRPGTVISYIVLKGSGRIGD
RAIPFDEFDPAKHKYD

Coordinates

Composite domains

1tgo_A_cm_1 (A: 328-386, 409-517)

Sequence

> 1tgo_A_cm_1 (A: 328-386, 409-517) THERMOSTABLE B DNA POLYMERASE
PMEAQLSRLVGQSLWDVSRSSTGNLVEWFLLRKAYERNELAPNKPDERELARRRESYAGY
PSIIITHNVSPDTLNREGCEEYDVAPQVGHKFCKDFPGFIPSLLGDLLEERQKVKKKMKA
TIDPIEKKLLDYRQRAIKILANSFYGYYGYAKARWYCKECAESVTAWG

Coordinates