1tk5_A

PDB Headers (abridged)

HEADER    TRANSFERASE/ELECTRON TRANSPORT/DNA      08-JUN-04   1TK5              
TITLE     T7 DNA POLYMERASE BINARY COMPLEX WITH 8 OXO GUANOSINE IN              
TITLE    2 THE TEMPLATING STRAND                                                
COMPND   2 MOLECULE: DNA POLYMERASE;                                            
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    L.G.BRIEBA,B.F.EICHMAN,R.J.KOKOSKA,S.DOUBLIE,T.A.KUNKEL,              
AUTHOR   2 T.ELLENBERGER

Sequence

> 1tk5_A (A:) DNA POLYMERASE
MIVSDIEANALLESVTKFHCGVIYDYSTAEYVSYRPSDFGAYLDALEAEVARGGLIVFHN
GHKYDVPALTKLAKLQLNREFHLPRENCIDTLVLSRLIHSNLKDTDMGLLRSGKLPGALE
AWGYRLGEMKGEYKDDFKRMLEEQGEEYVDGMEWWNFNEEMMDYNVQDVVVTKALLEKLL
SDKHYFPPEIDFTDVGYTTFWSESLEAVDIEHRAAWLLAKQERNGFPFDTKAIEELYVEL
AARRSELLRKLTETFGSWYQPKGGTEMFCHPRTGKPLPKYPRIKTPKVGGIFKKPKAQRE
GRCELDTREYVAGAPYTPVEHVVFNPSSRDHIQKKLQEAGWVPTKYTDKGAPVVDDEVLE
GVRVDDPEKQAAIDLIKEYLMIQKRIGQSAEGDKAWLRYVAEDGKIHGSVNPNGAVTGRA
THAFPNLAQIPGVRSPYGEQCRAAFGAEHHLDGITGKPWVQAGIDASGLELRCLAHFMAR
FDNGEYAHEILNGDIHTKNQIAAELPTRDNAKTFIYGFLYGAIGQIVGAGKERGKELKKK
FLENTPAIAALRESIQQTLVESVKWKRRWIKGLDGRKVHVRSPHAALNTLLQSAGALICK
LWIIKTEEMLVEKGLKHGWDGDFAYMAWVHDEIQVGCRTEEIAQVVIETAQEAMRWVGDH
WNFRCLLDTEGKMGPNWAICH

Coordinates

Link to SCOP

Link to Pfam

Link to Protein Data Bank

Structural Domains (with extensions added by structural compactness)

1tk5_A_str_1 (A: 1-211)

Sequence

> 1tk5_A_str_1 (A: 1-211) DNA POLYMERASE
MIVSDIEANALLESVTKFHCGVIYDYSTAEYVSYRPSDFGAYLDALEAEVARGGLIVFHN
GHKYDVPALTKLAKLQLNREFHLPRENCIDTLVLSRLIHSNLKDTDMGLLRSGKLPGALE
AWGYRLGEMKGEYKDDFKRMLEEQGEEYVDGMEWWNFNEEMMDYNVQDVVVTKALLEKLL
SDKHYFPPEIDFTDVGYTTFWSESL

Coordinates

1tk5_A_str_2 (A: 212-233, 411-436)

Sequence

> 1tk5_A_str_2 (A: 212-233, 411-436) DNA POLYMERASE
EAVDIEHRAAWLLAKQERNGFPAEDGKIHGSVNPNGAVTGRATHAFPN

Coordinates

1tk5_A_str_3 (A: 234-262, 334-410)

Sequence

> 1tk5_A_str_3 (A: 234-262, 334-410) DNA POLYMERASE
FDTKAIEELYVELAARRSELLRKLTETFGFNPSSRDHIQKKLQEAGWVPTKYTDKGAPVV
DDEVLEGVRVDDPEKQAAIDLIKEYLMIQKRIGQSAEGDKAWLRYV

Coordinates

1tk5_A_str_4 (A: 263-333)

Sequence

> 1tk5_A_str_4 (A: 263-333) DNA POLYMERASE
SWYQPKGGTEMFCHPRTGKPLPKYPRIKTPKVGGIFKKPKAQREGRCELDTREYVAGAPY
TPVEHVV

Coordinates

1tk5_A_str_5 (A: 437-479, 619-704)

Sequence

> 1tk5_A_str_5 (A: 437-479, 619-704) DNA POLYMERASE
LAQIPGVRSPYGEQCRAAFGAEHHLDGITGKPWVQAGIDASGLALICKLWIIKTEEMLVE
KGLKHGWDGDFAYMAWVHDEIQVGCRTEEIAQVVIETAQEAMRWVGDHWNFRCLLDTEGK
MGPNWAICH

Coordinates

1tk5_A_str_6 (A: 480-488, 565-618)

Sequence

> 1tk5_A_str_6 (A: 480-488, 565-618) DNA POLYMERASE
ELRCLAHFMLRESIQQTLVESVKWKRRWIKGLDGRKVHVRSPHAALNTLLQSAG

Coordinates

1tk5_A_str_7 (A: 489-564)

Sequence

> 1tk5_A_str_7 (A: 489-564) DNA POLYMERASE
ARFDNGEYAHEILNGDIHTKNQIAAELPTRDNAKTFIYGFLYGAIGQIVGAGKERGKELK
KKFLENTPAIAA

Coordinates

Structural Domains (with extensions added by sequence continuity)

1tk5_A_seq_1 (A: 1-211)

Sequence

> 1tk5_A_seq_1 (A: 1-211) DNA POLYMERASE
MIVSDIEANALLESVTKFHCGVIYDYSTAEYVSYRPSDFGAYLDALEAEVARGGLIVFHN
GHKYDVPALTKLAKLQLNREFHLPRENCIDTLVLSRLIHSNLKDTDMGLLRSGKLPGALE
AWGYRLGEMKGEYKDDFKRMLEEQGEEYVDGMEWWNFNEEMMDYNVQDVVVTKALLEKLL
SDKHYFPPEIDFTDVGYTTFWSESL

Coordinates

1tk5_A_seq_2 (A: 212-233, 411-436)

Sequence

> 1tk5_A_seq_2 (A: 212-233, 411-436) DNA POLYMERASE
EAVDIEHRAAWLLAKQERNGFPAEDGKIHGSVNPNGAVTGRATHAFPN

Coordinates

1tk5_A_seq_3 (A: 234-262, 334-410)

Sequence

> 1tk5_A_seq_3 (A: 234-262, 334-410) DNA POLYMERASE
FDTKAIEELYVELAARRSELLRKLTETFGFNPSSRDHIQKKLQEAGWVPTKYTDKGAPVV
DDEVLEGVRVDDPEKQAAIDLIKEYLMIQKRIGQSAEGDKAWLRYV

Coordinates

1tk5_A_seq_4 (A: 263-333)

Sequence

> 1tk5_A_seq_4 (A: 263-333) DNA POLYMERASE
SWYQPKGGTEMFCHPRTGKPLPKYPRIKTPKVGGIFKKPKAQREGRCELDTREYVAGAPY
TPVEHVV

Coordinates

1tk5_A_seq_5 (A: 437-479, 619-704)

Sequence

> 1tk5_A_seq_5 (A: 437-479, 619-704) DNA POLYMERASE
LAQIPGVRSPYGEQCRAAFGAEHHLDGITGKPWVQAGIDASGLALICKLWIIKTEEMLVE
KGLKHGWDGDFAYMAWVHDEIQVGCRTEEIAQVVIETAQEAMRWVGDHWNFRCLLDTEGK
MGPNWAICH

Coordinates

1tk5_A_seq_6 (A: 480-488, 565-618)

Sequence

> 1tk5_A_seq_6 (A: 480-488, 565-618) DNA POLYMERASE
ELRCLAHFMLRESIQQTLVESVKWKRRWIKGLDGRKVHVRSPHAALNTLLQSAG

Coordinates

1tk5_A_seq_7 (A: 489-564)

Sequence

> 1tk5_A_seq_7 (A: 489-564) DNA POLYMERASE
ARFDNGEYAHEILNGDIHTKNQIAAELPTRDNAKTFIYGFLYGAIGQIVGAGKERGKELK
KKFLENTPAIAA

Coordinates