HEADER    TRANSFERASE                             13-JUL-04   1U09              
TITLE     FOOTAND MOUTH DISEASE VIRUS RNA-DEPENDENT RNA POLYMERASE              
COMPND   2 MOLECULE: POLYPROTEIN;                                               
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    C.FERRER-ORTA,A.ARIAS,R.PEREZ-LUQUE,C.ESCARMIS,E.DOMINGO,             
AUTHOR   2 N.VERDAGUER                                                          

> 1u09_A (A:) POLYPROTEIN
GLIVDTRDVEERVHVMRKTKLAPTVAHGVFNPEFGPAALSNKDPRLNEGVVLDEVIFSKH
KGDTKMSAEDKALFRRCAADYASRLHSVLGTANAPLSIYEAIKGVDGLDAMEPDTAPGLP
WALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRAGKTRI
VDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPDVDWQRFGTHFAQYRNVWDVD
YSAFDANHCSDAMNIMFEEVFRTEFGFHPNAEWILKTLVNTEHAYENKRITVEGGMPSGC
SATSIINTILNNIYVLYALRRHYEGVELDTYTMISYGDDIVVASDYDLDFEALKPHFKSL
GQTITPADKSDKGFVLGHSITDVTFLKRHFHMDYGTGFYKPVMASKTLEAILSFARRGTI
QEKLISVAGLAVHSGPDEYRRLFEPFQGLFEIPSYRSLYLRWVNAVCGDAAALEHH

Structural Domains (with extensions added by structural compactness)

1u09_A_str_1 (A: 1-203)

Sequence

> 1u09_A_str_1 (A: 1-203) POLYPROTEIN
GLIVDTRDVEERVHVMRKTKLAPTVAHGVFNPEFGPAALSNKDPRLNEGVVLDEVIFSKH
KGDTKMSAEDKALFRRCAADYASRLHSVLGTANAPLSIYEAIKGVDGLDAMEPDTAPGLP
WALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRAGKTRI
VDVLPVEHILYTRMMIGRFCAQM

Coordinates

---

1u09_A_str_2 (A: 204-244, 308-390)

Sequence

> 1u09_A_str_2 (A: 204-244, 308-390) POLYPROTEIN
HSNNGPQIGSAVGCNPDVDWQRFGTHFAQYRNVWDVDYSAFTILNNIYVLYALRRHYEGV
ELDTYTMISYGDDIVVASDYDLDFEALKPHFKSLGQTITPADKSDKGFVLGHSITDVTFL
KRHF

Coordinates

---

1u09_A_str_3 (A: 245-307)

Sequence

> 1u09_A_str_3 (A: 245-307) POLYPROTEIN
DANHCSDAMNIMFEEVFRTEFGFHPNAEWILKTLVNTEHAYENKRITVEGGMPSGCSATS
IIN

Coordinates

---

1u09_A_str_4 (A: 391-476)

Sequence

> 1u09_A_str_4 (A: 391-476) POLYPROTEIN
HMDYGTGFYKPVMASKTLEAILSFARRGTIQEKLISVAGLAVHSGPDEYRRLFEPFQGLF
EIPSYRSLYLRWVNAVCGDAAALEHH

Coordinates

Structural Domains (with extensions added by sequence continuity)

1u09_A_seq_1 (A: 1-203)

Sequence

> 1u09_A_seq_1 (A: 1-203) POLYPROTEIN
GLIVDTRDVEERVHVMRKTKLAPTVAHGVFNPEFGPAALSNKDPRLNEGVVLDEVIFSKH
KGDTKMSAEDKALFRRCAADYASRLHSVLGTANAPLSIYEAIKGVDGLDAMEPDTAPGLP
WALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRAGKTRI
VDVLPVEHILYTRMMIGRFCAQM

Coordinates

---

1u09_A_seq_2 (A: 204-244, 308-390)

Sequence

> 1u09_A_seq_2 (A: 204-244, 308-390) POLYPROTEIN
HSNNGPQIGSAVGCNPDVDWQRFGTHFAQYRNVWDVDYSAFTILNNIYVLYALRRHYEGV
ELDTYTMISYGDDIVVASDYDLDFEALKPHFKSLGQTITPADKSDKGFVLGHSITDVTFL
KRHF

Coordinates

---

1u09_A_seq_3 (A: 245-307)

Sequence

> 1u09_A_seq_3 (A: 245-307) POLYPROTEIN
DANHCSDAMNIMFEEVFRTEFGFHPNAEWILKTLVNTEHAYENKRITVEGGMPSGCSATS
IIN

Coordinates

---

1u09_A_seq_4 (A: 391-476)

Sequence

> 1u09_A_seq_4 (A: 391-476) POLYPROTEIN
HMDYGTGFYKPVMASKTLEAILSFARRGTIQEKLISVAGLAVHSGPDEYRRLFEPFQGLF
EIPSYRSLYLRWVNAVCGDAAALEHH

Coordinates

Extensions (N/C terminal extensions and linkers)

1u09_A_ext_1 (A: 19-37)

Sequence

> 1u09_A_ext_1 (A: 19-37) POLYPROTEIN
TKLAPTVAHGVFNPEFGPA

Coordinates

---

1u09_A_ext_2 (A: 165-178)

Sequence

> 1u09_A_ext_2 (A: 165-178) POLYPROTEIN
DEIRPMEKVRAGKT

Coordinates

Composite domains

1u09_A_cm_1 (A: 1-18, 38-164, 179-203, 245-307)

Sequence

> 1u09_A_cm_1 (A: 1-18, 38-164, 179-203, 245-307) POLYPROTEIN
GLIVDTRDVEERVHVMRKALSNKDPRLNEGVVLDEVIFSKHKGDTKMSAEDKALFRRCAA
DYASRLHSVLGTANAPLSIYEAIKGVDGLDAMEPDTAPGLPWALQGKRRGALIDFENGTV
GPEVEAALKLMEKREYKFACQTFLKRIVDVLPVEHILYTRMMIGRFCAQMDANHCSDAMN
IMFEEVFRTEFGFHPNAEWILKTLVNTEHAYENKRITVEGGMPSGCSATSIIN

Coordinates

---

1u09_A_cm_2 (A: 19-32, 391-476)

Sequence

> 1u09_A_cm_2 (A: 19-32, 391-476) POLYPROTEIN
TKLAPTVAHGVFNPHMDYGTGFYKPVMASKTLEAILSFARRGTIQEKLISVAGLAVHSGP
DEYRRLFEPFQGLFEIPSYRSLYLRWVNAVCGDAAALEHH

Coordinates

---

1u09_A_cm_3 (A: 33-37, 165-178)

Sequence

> 1u09_A_cm_3 (A: 33-37, 165-178) POLYPROTEIN
EFGPADEIRPMEKVRAGKT

Coordinates