1u4b_A
HEADER TRANSFERASE/DNA 23-JUL-04 1U4B
TITLE EXTENSION OF AN ADENINE-8OXOGUANINE MISMATCH
COMPND 2 MOLECULE: DNA POLYMERASE I;
EXPDTA X-RAY DIFFRACTION
AUTHOR G.W.HSU,M.OBER,T.CARELL,L.S.BEESE
> 1u4b_A (A:) DNA POLYMERASE I
AAMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQ
FVAWLGDETKKKSMFDSKRAAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKM
KQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWELERPFLDELRRNEQDRLLVE
LEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGV
ILFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVR
PDTKKVHTIFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQ
IELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGI
SDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDI
TSRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEA
PKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTWYDAK
Structural Domains (with extensions added by structural compactness)
1u4b_A_str_1
(A: 297-468)
> 1u4b_A_str_1 (A: 297-468) DNA POLYMERASE I
AAMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQ
FVAWLGDETKKKSMFDSKRAAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKM
KQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWELERPFLDELRRN
1u4b_A_str_2
(A: 469-494, 601-625)
> 1u4b_A_str_2 (A: 469-494, 601-625) DNA POLYMERASE I
EQDRLLVELEQPLSSILAEMEFAGVKKVHTIFNQALTQTGRLSSTEPNLQN
1u4b_A_str_3
(A: 495-600)
> 1u4b_A_str_3 (A: 495-600) DNA POLYMERASE I
VDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPVLKKTKTGY
STSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTK
1u4b_A_str_4
(A: 626-657, 801-876)
> 1u4b_A_str_4 (A: 626-657, 801-876) DNA POLYMERASE I
IPIRLEEGRKIRQAFVPSESDWLIFAADYSQIADIIKKAMIDLNARLKEERLQAHLLLQV
HDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTWYDAK
1u4b_A_str_5
(A: 658-667, 749-800)
> 1u4b_A_str_5 (A: 658-667, 749-800) DNA POLYMERASE I
ELRVLAHIAEYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQG
SA
1u4b_A_str_6
(A: 668-748)
> 1u4b_A_str_6 (A: 668-748) DNA POLYMERASE I
DDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGLAQNLNI
SRKEAAEFIERYFESFPGVKR
Structural Domains (with extensions added by sequence continuity)
1u4b_A_seq_1
(A: 297-468)
> 1u4b_A_seq_1 (A: 297-468) DNA POLYMERASE I
AAMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQ
FVAWLGDETKKKSMFDSKRAAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKM
KQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWELERPFLDELRRN
1u4b_A_seq_2
(A: 469-494, 601-625)
> 1u4b_A_seq_2 (A: 469-494, 601-625) DNA POLYMERASE I
EQDRLLVELEQPLSSILAEMEFAGVKKVHTIFNQALTQTGRLSSTEPNLQN
1u4b_A_seq_3
(A: 495-600)
> 1u4b_A_seq_3 (A: 495-600) DNA POLYMERASE I
VDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPVLKKTKTGY
STSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTK
1u4b_A_seq_4
(A: 626-657, 801-876)
> 1u4b_A_seq_4 (A: 626-657, 801-876) DNA POLYMERASE I
IPIRLEEGRKIRQAFVPSESDWLIFAADYSQIADIIKKAMIDLNARLKEERLQAHLLLQV
HDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTWYDAK
1u4b_A_seq_5
(A: 658-667, 749-800)
> 1u4b_A_seq_5 (A: 658-667, 749-800) DNA POLYMERASE I
ELRVLAHIAEYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQG
SA
1u4b_A_seq_6
(A: 668-748)
> 1u4b_A_seq_6 (A: 668-748) DNA POLYMERASE I
DDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGLAQNLNI
SRKEAAEFIERYFESFPGVKR