1ubl_L

PDB Headers (abridged)

HEADER    OXIDOREDUCTASE                          04-APR-03   1UBL              
TITLE     THREE-DIMENSIONAL STRUCTURE OF THE CARBON MONOXIDE COMPLEX            
TITLE    2 OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI           
TITLE    3 F                                                                    
COMPND   2 MOLECULE: PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT;              
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    H.OGATA,Y.MIZOGUCHI,N.MIZUNO,K.MIKI,S.ADACHI,N.YASUOKA,               
AUTHOR   2 T.YAGI,O.YAMAUCHI,S.HIROTA,Y.HIGUCHI

Sequence

> 1ubl_L (L:) PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT
SSYSGPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQ
RTCGVCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVD
VTAALKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAY
YLDPETNLIATAHYLEALRLQVKAARAMAVFGAKNPHTQFTVVGGVTCYDALTPQRIAEF
EALWKETKAFVDEVYIPDLLVVAAAYKDWTQYGGTDNFITFGEFPKDEYDLNSRFFKPGV
VFKRDFKNIKPFDKMQIEEHVRHSWYEGAEARHPWKGQTQPKYTDLHGDDRYSWMKAPRY
MGEPMETGPLAQVLIAYSQGHPKVKAVTDAVLAKLGVGPEALFSTLGRTAARGIETAVIA
EYVGVMLQEYKDNIAKGDNVICAPWEMPKQAEGVGFVNAPRGGLSHWIRIEDGKIGNFQL
VVPSTWTLGPRCDKNKLSPVEASLIGTPVADAKRPVEILRTVHSFDPCIACGVH

Coordinates

Link to SCOP

Link to Pfam

Link to Protein Data Bank

Structural Domains (with extensions added by structural compactness)

1ubl_L_str_1 (L: 19-59, 502-552)

Sequence

> 1ubl_L_str_1 (L: 19-59, 502-552) PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT
SSYSGPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRSTWTLGPRCDKNKLSPVEA
SLIGTPVADAKRPVEILRTVHSFDPCIACGVH

Coordinates

1ubl_L_str_2 (L: 60-102, 463-501)

Sequence

> 1ubl_L_str_2 (L: 60-102, 463-501) PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT
GLEIILKGRDPRDAQHFTQRTCGVCTYTHALASTRCVDNAVGVWEMPKQAEGVGFVNAPR
GGLSHWIRIEDGKIGNFQLVVP

Coordinates

1ubl_L_str_3 (L: 103-292, 422-462)

Sequence

> 1ubl_L_str_3 (L: 103-292, 422-462) PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT
HIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAALKADPAKAAKVASSISPRKT
TAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYLDPETNLIATAHYLEALRLQVKA
ARAMAVFGAKNPHTQFTVVGGVTCYDALTPQRIAEFEALWKETKAFVDEVYIPDLLVVAA
AYKDWTQYGGSTLGRTAARGIETAVIAEYVGVMLQEYKDNIAKGDNVICAP

Coordinates

1ubl_L_str_4 (L: 293-335, 378-421)

Sequence

> 1ubl_L_str_4 (L: 293-335, 378-421) PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT
TDNFITFGEFPKDEYDLNSRFFKPGVVFKRDFKNIKPFDKMQIYMGEPMETGPLAQVLIA
YSQGHPKVKAVTDAVLAKLGVGPEALF

Coordinates

1ubl_L_str_5 (L: 336-377)

Sequence

> 1ubl_L_str_5 (L: 336-377) PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT
EEHVRHSWYEGAEARHPWKGQTQPKYTDLHGDDRYSWMKAPR

Coordinates

Structural Domains (with extensions added by sequence continuity)

1ubl_L_seq_1 (L: 19-59, 502-552)

Sequence

> 1ubl_L_seq_1 (L: 19-59, 502-552) PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT
SSYSGPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRSTWTLGPRCDKNKLSPVEA
SLIGTPVADAKRPVEILRTVHSFDPCIACGVH

Coordinates

1ubl_L_seq_2 (L: 60-102, 463-501)

Sequence

> 1ubl_L_seq_2 (L: 60-102, 463-501) PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT
GLEIILKGRDPRDAQHFTQRTCGVCTYTHALASTRCVDNAVGVWEMPKQAEGVGFVNAPR
GGLSHWIRIEDGKIGNFQLVVP

Coordinates

1ubl_L_seq_3 (L: 103-292, 422-462)

Sequence

> 1ubl_L_seq_3 (L: 103-292, 422-462) PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT
HIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAALKADPAKAAKVASSISPRKT
TAADLKAVQDKLKTFVETGQLGPFTNAYFLGGHPAYYLDPETNLIATAHYLEALRLQVKA
ARAMAVFGAKNPHTQFTVVGGVTCYDALTPQRIAEFEALWKETKAFVDEVYIPDLLVVAA
AYKDWTQYGGSTLGRTAARGIETAVIAEYVGVMLQEYKDNIAKGDNVICAP

Coordinates

1ubl_L_seq_4 (L: 293-335, 378-421)

Sequence

> 1ubl_L_seq_4 (L: 293-335, 378-421) PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT
TDNFITFGEFPKDEYDLNSRFFKPGVVFKRDFKNIKPFDKMQIYMGEPMETGPLAQVLIA
YSQGHPKVKAVTDAVLAKLGVGPEALF

Coordinates

1ubl_L_seq_5 (L: 336-377)

Sequence

> 1ubl_L_seq_5 (L: 336-377) PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT
EEHVRHSWYEGAEARHPWKGQTQPKYTDLHGDDRYSWMKAPR

Coordinates