2btv_A

PDB Headers (abridged)

HEADER    VIRUS/VIRAL PROTEIN                     05-SEP-98   2BTV              
TITLE     ATOMIC MODEL FOR BLUETONGUE VIRUS (BTV) CORE                          
COMPND   2 MOLECULE: VP3 CORE PROTEIN;                                          
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    J.M.GRIMES,J.N.BURROUGHS,P.GOUET,J.M.DIPROSE,R.MALBY,                 
AUTHOR   2 S.ZIENTRAS,P.P.C.MERTENS,D.I.STUART

Sequence

> 2btv_A (A:) VP3 CORE PROTEIN
VDFTVPDVQQILDDIKALAAEQVYKIVKVPSTSFRHIVTQSRDRVLRVDTYYEEMSQVGD
VITEDEPEKFYSTIIKKVRFIRGKGSFILHDIPARDHRGMEVAEPEVLGVEFKNVLPVLT
AEHRAMIQNALDGSIIENGNVATRDVDVFIGACSEPIYRIYNRLQGYIEAVQLQELRNSI
GWLERLGQRKRITYSQEVLTDFRRQDMIWVLALQLPVNPQVVWDVPRSSIANLIMNIATC
LPTGEYIAPNPRISSITLTQRITTTGPFAILTGSTPTAQQLNDVRKIYLALMFPGQIILD
LKIDPGERMDPAVRMVAGVVGHLLFTAGGRFTNLTQNMARQLDIALNDYLLYMYNTRVQV
NYGPTGEPLDFQIGRNQYDCNVFRADFATGTGYNGWATIDVEYRDPAPYVHAQRYIRYCG
IDSRELINPTTYGIGMTYHCYNEMLRMLVAAGKDSEAAYFRSMLPFHMVRFARINQIINE
DLHSVFSLPDDMFNALLPDLIAGAHQNADPVVLDVSWISLWFAFNRSFEPTHRNEMLEIA
PLIESVYASELSVMKVDMRHLSLMQRRFPDVLIQARPSHFWKAVLNDSPEAVKAVMNLSH
SHNFINIRDMMRWVLLPSLQPSLKLVLEEEAWAAANDFEDLMLTDQVYMHRDMLPEPRLD
DIERFRQEGFYYTNMLEAPPEIDRVVQYTYEIARLQANMGQFRAALRRIMDDDDWVRFGG
VLRTVRVKFFDARPPDDILQGLPFSYDTNEKGGLSYATIKYATETTIFYLIYNVEFSNTP
DSLVLINPTYTMTKVFINKRIVERVRVGQILAVLNRRFVAYKGKMRIMDITQSLKMGTKL
AAPTV

Coordinates

Link to SCOP

Link to Pfam

Link to Protein Data Bank

Structural Domains (with extensions added by structural compactness)

2btv_A_str_1 (A: 57-274, 677-700, 852-901)

Sequence

> 2btv_A_str_1 (A: 57-274, 677-700, 852-901) VP3 CORE PROTEIN
VDFTVPDVQQILDDIKALAAEQVYKIVKVPSTSFRHIVTQSRDRVLRVDTYYEEMSQVGD
VITEDEPEKFYSTIIKKVRFIRGKGSFILHDIPARDHRGMEVAEPEVLGVEFKNVLPVLT
AEHRAMIQNALDGSIIENGNVATRDVDVFIGACSEPIYRIYNRLQGYIEAVQLQELRNSI
GWLERLGQRKRITYSQEVLTDFRRQDMIWVLALQLPVNPSLKLVLEEEAWAAANDFEDLM
LTFINKRIVERVRVGQILAVLNRRFVAYKGKMRIMDITQSLKMGTKLAAPTV

Coordinates

2btv_A_str_2 (A: 275-384, 446-597)

Sequence

> 2btv_A_str_2 (A: 275-384, 446-597) VP3 CORE PROTEIN
PQVVWDVPRSSIANLIMNIATCLPTGEYIAPNPRISSITLTQRITTTGPFAILTGSTPTA
QQLNDVRKIYLALMFPGQIILDLKIDPGERMDPAVRMVAGVVGHLLFTAGGTGYNGWATI
DVEYRDPAPYVHAQRYIRYCGIDSRELINPTTYGIGMTYHCYNEMLRMLVAAGKDSEAAY
FRSMLPFHMVRFARINQIINEDLHSVFSLPDDMFNALLPDLIAGAHQNADPVVLDVSWIS
LWFAFNRSFEPTHRNEMLEIAP

Coordinates

2btv_A_str_3 (A: 385-445)

Sequence

> 2btv_A_str_3 (A: 385-445) VP3 CORE PROTEIN
GRFTNLTQNMARQLDIALNDYLLYMYNTRVQVNYGPTGEPLDFQIGRNQYDCNVFRADFA
T

Coordinates

2btv_A_str_4 (A: 598-676)

Sequence

> 2btv_A_str_4 (A: 598-676) VP3 CORE PROTEIN
LIESVYASELSVMKVDMRHLSLMQRRFPDVLIQARPSHFWKAVLNDSPEAVKAVMNLSHS
HNFINIRDMMRWVLLPSLQ

Coordinates

2btv_A_str_5 (A: 701-851)

Sequence

> 2btv_A_str_5 (A: 701-851) VP3 CORE PROTEIN
DQVYMHRDMLPEPRLDDIERFRQEGFYYTNMLEAPPEIDRVVQYTYEIARLQANMGQFRA
ALRRIMDDDDWVRFGGVLRTVRVKFFDARPPDDILQGLPFSYDTNEKGGLSYATIKYATE
TTIFYLIYNVEFSNTPDSLVLINPTYTMTKV

Coordinates

Structural Domains (with extensions added by sequence continuity)

2btv_A_seq_1 (A: 57-274, 677-700, 852-901)

Sequence

> 2btv_A_seq_1 (A: 57-274, 677-700, 852-901) VP3 CORE PROTEIN
VDFTVPDVQQILDDIKALAAEQVYKIVKVPSTSFRHIVTQSRDRVLRVDTYYEEMSQVGD
VITEDEPEKFYSTIIKKVRFIRGKGSFILHDIPARDHRGMEVAEPEVLGVEFKNVLPVLT
AEHRAMIQNALDGSIIENGNVATRDVDVFIGACSEPIYRIYNRLQGYIEAVQLQELRNSI
GWLERLGQRKRITYSQEVLTDFRRQDMIWVLALQLPVNPSLKLVLEEEAWAAANDFEDLM
LTFINKRIVERVRVGQILAVLNRRFVAYKGKMRIMDITQSLKMGTKLAAPTV

Coordinates

2btv_A_seq_2 (A: 275-384, 446-597)

Sequence

> 2btv_A_seq_2 (A: 275-384, 446-597) VP3 CORE PROTEIN
PQVVWDVPRSSIANLIMNIATCLPTGEYIAPNPRISSITLTQRITTTGPFAILTGSTPTA
QQLNDVRKIYLALMFPGQIILDLKIDPGERMDPAVRMVAGVVGHLLFTAGGTGYNGWATI
DVEYRDPAPYVHAQRYIRYCGIDSRELINPTTYGIGMTYHCYNEMLRMLVAAGKDSEAAY
FRSMLPFHMVRFARINQIINEDLHSVFSLPDDMFNALLPDLIAGAHQNADPVVLDVSWIS
LWFAFNRSFEPTHRNEMLEIAP

Coordinates

2btv_A_seq_3 (A: 385-445)

Sequence

> 2btv_A_seq_3 (A: 385-445) VP3 CORE PROTEIN
GRFTNLTQNMARQLDIALNDYLLYMYNTRVQVNYGPTGEPLDFQIGRNQYDCNVFRADFA
T

Coordinates

2btv_A_seq_4 (A: 598-676)

Sequence

> 2btv_A_seq_4 (A: 598-676) VP3 CORE PROTEIN
LIESVYASELSVMKVDMRHLSLMQRRFPDVLIQARPSHFWKAVLNDSPEAVKAVMNLSHS
HNFINIRDMMRWVLLPSLQ

Coordinates

2btv_A_seq_5 (A: 701-851)

Sequence

> 2btv_A_seq_5 (A: 701-851) VP3 CORE PROTEIN
DQVYMHRDMLPEPRLDDIERFRQEGFYYTNMLEAPPEIDRVVQYTYEIARLQANMGQFRA
ALRRIMDDDDWVRFGGVLRTVRVKFFDARPPDDILQGLPFSYDTNEKGGLSYATIKYATE
TTIFYLIYNVEFSNTPDSLVLINPTYTMTKV

Coordinates