A1E965 | Tripartite motif-containing 5 alpha isoform   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D A1E965 15 CPICLELLTEPLSLHC                  CCCCCCCCCCCCCCCC c1aR-4 uniq 0.102 0.096 0.027 boundary boundary|RING-HC_TRIM5_like-C-IV; 0.0
2 fp_D A1E965 73 HVANIVEKLREVKLSP                  HHHHHHHHHHCCCCCC c1a-5 multi-selected 0.351 0.184 0.378 boundary boundary|RING-HC_TRIM5_like-C-IV; 0.0
3 fp_D A1E965 74 VANIVEKLREVKLSP                 HHHHHHHHHCCCCCC c1b-4 multi 0.37 0.188 0.376 boundary boundary|RING-HC_TRIM5_like-C-IV; 0.0
4 fp_D A1E965 244 SMMDLLQGVDGIIK                CHHHHHCCCHHHHC c3-4 multi-selected 0.269 0.161 0.288 boundary MID|SMC_N superfamily; 0.0
5 fp_D A1E965 244 SMMDLLQGVDGIIKRIE                   CHHHHHCCCHHHHCCCC c1cR-5 multi 0.276 0.165 0.295 boundary MID|SMC_N superfamily; 0.0
6 fp_D A1E965 248 LLQGVDGIIKRIEN                HHCCCHHHHCCCCC c3-4 multi 0.294 0.168 0.291 boundary MID|SMC_N superfamily; 0.0
7 fp_D A1E965 251 GVDGIIKRIENMTLKK                  CCHHHHCCCCCCCCCC c1a-5 multi-selected 0.291 0.171 0.323 __ MID|SMC_N superfamily; 0.0
8 fp_D A1E965 252 VDGIIKRIENMTLKK                 CHHHHCCCCCCCCCC c1b-4 multi 0.296 0.172 0.327 boundary MID|SMC_N superfamily; 0.0
9 fp_D A1E965 276 RVFRAPDLKGMLDMFR                  CCCCCCCHHHHHHHHH c1d-AT-5 uniq 0.044 0.052 0.279 boundary MID|SMC_N superfamily; boundary|SPRY_PRY_TRIM5; 0.0
10 fp_D A1E965 282 DLKGMLDMFRELTD                CHHHHHHHHHHHCC c3-4 uniq 0.026 0.038 0.214 boundary boundary|SMC_N superfamily; boundary|SPRY_PRY_TRIM5; 0.0
11 fp_D A1E965 340 SLTNFNYCTGVLGS                CCCCCCCCCEEECC c3-AT uniq 0.019 0.03 0.114 boundary boundary|SMC_N superfamily; MID|SPRY_PRY_TRIM5; 0.143
12 fp_D A1E965 423 PFAPFIVPLSVIIC                CCCCCCCCCCCCCC c3-4 uniq 0.094 0.05 0.019 boundary MID|SPRY_PRY_TRIM5; 0.0
13 fp_D A1E965 440 VGVFVDYEACTVSFFN                  EEEEECCCCCEEEEEE c1a-AT-4 multi-selected 0.01 0.01 0.013 boundary MID|SPRY_PRY_TRIM5; 0.286
14 fp_beta_O A1E965 444 VDYEACTVSFFNITN                 ECCCCCEEEEEECCC c1b-AT-4 multi 0.01 0.012 0.012 ORD MID|SPRY_PRY_TRIM5; 0.714
15 fp_O A1E965 449 CTVSFFNITNHGFLIYK                   CEEEEEECCCCCCCEEE c1c-AT-4 multi-selected 0.01 0.015 0.01 ORD MID|SPRY_PRY_TRIM5; 0.375
16 fp_O A1E965 450 TVSFFNITNHGFLIYK                  EEEEEECCCCCCCEEE c1d-AT-5 multi 0.01 0.015 0.01 ORD MID|SPRY_PRY_TRIM5; 0.286

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment