ABC40399.1 | mutant nucleolar phosphoprotein B23   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_beta_D ABC40399.1 38 NEHQLSLRTVSLGA                CCCEEEEEEEECCC c2-4 uniq 0.039 0.049 0.488 boundary boundary|Nucleoplasmin; 1.0
2 fp_D ABC40399.1 45 RTVSLGAGAKDELHIVE                   EEEECCCCCCCCCEEEE c1c-AT-4 uniq 0.04 0.053 0.443 boundary MID|Nucleoplasmin; 0.0
3 fp_beta_D ABC40399.1 68 EGSPIKVTLATLKMSV                  CCCCEEEEEEEEECCC c1a-4 multi-selected 0.074 0.046 0.423 boundary MID|Nucleoplasmin; 1.0
4 fp_beta_D ABC40399.1 68 EGSPIKVTLATLKMSV                  CCCCEEEEEEEEECCC c1d-AT-4 multi 0.074 0.046 0.423 boundary MID|Nucleoplasmin; 1.0
5 fp_beta_D ABC40399.1 70 SPIKVTLATLKMSV                CCEEEEEEEEECCC c2-4 multi-selected 0.066 0.038 0.429 boundary MID|Nucleoplasmin; 1.0
6 fp_beta_D ABC40399.1 70 SPIKVTLATLKMSVQP                  CCEEEEEEEEECCCCC c1a-AT-4 multi 0.063 0.04 0.423 boundary MID|Nucleoplasmin; 1.0
7 fp_beta_D ABC40399.1 70 SPIKVTLATLKMSVQP                  CCEEEEEEEEECCCCC c1d-AT-4 multi 0.063 0.04 0.423 boundary MID|Nucleoplasmin; 1.0
8 fp_beta_D ABC40399.1 72 IKVTLATLKMSVQP                EEEEEEEEECCCCC c2-AT-4 multi 0.056 0.035 0.423 boundary MID|Nucleoplasmin; 0.857
9 fp_beta_D ABC40399.1 72 IKVTLATLKMSVQPTV                  EEEEEEEEECCCCCCC c1aR-4 multi-selected 0.054 0.036 0.433 boundary MID|Nucleoplasmin; 0.714
10 fp_D ABC40399.1 82 SVQPTVSLGGFEITP                 CCCCCCCCCCCEECC c1b-AT-5 multi 0.033 0.041 0.425 boundary boundary|Nucleoplasmin; 0.0
11 fp_D ABC40399.1 83 VQPTVSLGGFEITP                CCCCCCCCCCEECC c2-4 multi-selected 0.032 0.041 0.433 boundary boundary|Nucleoplasmin; 0.0
12 fp_beta_D ABC40399.1 91 GFEITPPVVLRLKC                CCEECCCEEEEEEE c3-AT uniq 0.019 0.022 0.413 boundary boundary|Nucleoplasmin; 0.571
13 fp_D ABC40399.1 264 VEAKFINYVKNCFRMTD                   HHHHHHHHHHHCCCCCC c1c-4 multi-selected 0.041 0.08 0.404 boundary small|NPM1-C; 0.0
14 fp_D ABC40399.1 265 EAKFINYVKNCFRMTD                  HHHHHHHHHHCCCCCC c1d-4 multi 0.03 0.078 0.398 boundary small|NPM1-C; 0.0
15 cand_D ABC40399.1 283 AIQDLCMAVEEVSLRK    +++*+*++*++   HHHHHHHHHHHHHCCC c1a-5 multi-selected 0.135 0.217 0.424 boundary 0.0
16 cand_D ABC40399.1 283 AIQDLCMAVEEVSLRK    +++*+*++*++   HHHHHHHHHHHHHCCC c1d-AT-5 multi 0.135 0.217 0.424 boundary 0.0
17 cand_D ABC40399.1 285 QDLCMAVEEVSLRK  +++*+*++*++   HHHHHHHHHHHCCC c2-4 multi 0.153 0.231 0.422 boundary 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment