O00255 | menin   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D O00255 9 TLFPLRSIDDVVRLFA                  CCCCCCCHHHHHHHHH c1d-5 multi 0.035 0.082 0.071 boundary boundary|Menin; 0.0
2 fp_D O00255 12 PLRSIDDVVRLFAA                CCCCHHHHHHHHHH c3-4 multi-selected 0.023 0.063 0.071 boundary boundary|Menin; 0.0
3 cand_D O00255 30 EEPDLVLLSLVLGF    ++++++*+*   CCCCHHHHHHHHHH c2-4 multi-selected 0.044 0.041 0.023 boundary MID|Menin; 0.0
4 cand_D O00255 30 EEPDLVLLSLVLGFVE    ++++++*+*     CCCCHHHHHHHHHHHH c1d-4 multi 0.04 0.04 0.021 boundary MID|Menin; 0.0
5 cand_D O00255 32 PDLVLLSLVLGFVEHF  ++++++*+*       CCHHHHHHHHHHHHHH c1aR-4 multi-selected 0.032 0.037 0.019 boundary MID|Menin; 0.0
6 cand_D O00255 33 DLVLLSLVLGFVEHFL ++++++*+*        CHHHHHHHHHHHHHHC c1aR-5 multi-selected 0.027 0.036 0.018 boundary MID|Menin; 0.0
7 cand_D O00255 33 DLVLLSLVLGFVEH ++++++*+*      CHHHHHHHHHHHHH c3-4 multi-selected 0.028 0.036 0.019 boundary MID|Menin; 0.0
8 fp_D O00255 36 LLSLVLGFVEHFLA +++*+*         HHHHHHHHHHHHCC c3-4 multi-selected 0.019 0.036 0.016 boundary MID|Menin; 0.0
9 fp_D O00255 36 LLSLVLGFVEHFLAVNR +++*+*            HHHHHHHHHHHHCCCCC c1c-5 multi-selected 0.031 0.05 0.022 boundary MID|Menin; 0.0
10 cand_D O00255 37 LSLVLGFVEHFLAVNR ++*+*            HHHHHHHHHHHCCCCC c1aR-4 multi-selected 0.031 0.05 0.02 boundary MID|Menin; 0.0
11 fp_D O00255 37 LSLVLGFVEHFLAVNR ++*+*            HHHHHHHHHHHCCCCC c1d-4 multi 0.031 0.05 0.02 boundary MID|Menin; 0.0
12 fp_D O00255 39 LVLGFVEHFLAVNR *+*            HHHHHHHHHCCCCC c3-4 multi-selected 0.033 0.052 0.02 boundary MID|Menin; 0.0
13 fp_D O00255 72 PGGLTYFPVADLSIIA                  CCCCCCCCCCCHHHHH c1a-AT-4 multi 0.184 0.207 0.118 boundary MID|Menin; 0.0
14 fp_D O00255 74 GLTYFPVADLSIIA                CCCCCCCCCHHHHH c2-5 multi-selected 0.114 0.149 0.088 boundary MID|Menin; 0.0
15 fp_D O00255 89 LYARFTAQIRGAVDLSL                   HHHHHHHHHHCCCCCCC c1c-4 multi-selected 0.042 0.119 0.067 boundary MID|Menin; 0.0
16 fp_D O00255 90 YARFTAQIRGAVDLSL                  HHHHHHHHHCCCCCCC c1d-AT-4 multi 0.044 0.121 0.07 boundary MID|Menin; 0.0
17 fp_D O00255 93 FTAQIRGAVDLSLYP                 HHHHHHCCCCCCCCC c1b-AT-4 multi 0.07 0.144 0.101 boundary MID|Menin; 0.0
18 fp_O O00255 157 VAFAVVGACQALGLRD                  HHHHHHHHHHHCCCCC c1d-AT-4 uniq 0.02 0.013 0.063 ORD MID|Menin; 0.0
19 fp_O O00255 163 GACQALGLRDVHLAL                 HHHHHCCCCCCEEEE c1b-AT-4 multi 0.01 0.012 0.048 ORD MID|Menin; 0.0
20 fp_O O00255 164 ACQALGLRDVHLAL                HHHHCCCCCCEEEE c2-4 multi-selected 0.01 0.013 0.047 ORD MID|Menin; 0.0
21 fp_D O00255 166 QALGLRDVHLALSEDH                  HHCCCCCCEEEECCCE c1aR-4 multi-selected 0.01 0.013 0.056 boundary MID|Menin; 0.429
22 fp_D O00255 232 RKMEVAFMVCAINPSIDL                    CCCCHHHHHHCCCCCCCC c4-4 multi 0.038 0.056 0.066 boundary MID|Menin; 0.0
23 fp_D O00255 232 RKMEVAFMVCAINPSI                  CCCCHHHHHHCCCCCC c1aR-4 multi-selected 0.027 0.046 0.065 boundary MID|Menin; 0.0
24 fp_D O00255 236 VAFMVCAINPSIDLHT                  HHHHHHCCCCCCCCCC c1aR-4 multi-selected 0.056 0.073 0.079 boundary MID|Menin; 0.0
25 fp_D O00255 243 INPSIDLHTDSLELLQ                + CCCCCCCCCCCHHHHH c1a-AT-4 multi-selected 0.088 0.086 0.1 boundary MID|Menin; 0.0
26 fp_D O00255 245 PSIDLHTDSLELLQ              + CCCCCCCCCHHHHH c2-AT-4 multi 0.096 0.091 0.102 boundary MID|Menin; 0.0
27 cand_D O00255 247 IDLHTDSLELLQLQQ            ++++ CCCCCCCHHHHHHHH c1b-AT-4 multi 0.091 0.078 0.092 boundary MID|Menin; 0.0
28 cand_D O00255 252 DSLELLQLQQKLLWLL       ++++++++** CCHHHHHHHHHHHHHH c1aR-5 multi-selected 0.053 0.036 0.068 boundary MID|Menin; 0.0
29 fp_D O00255 262 KLLWLLYDLGHLER ++++**         HHHHHHHHCCCCCC c3-4 uniq 0.011 0.03 0.029 boundary MID|Menin; 0.0
30 fp_D O00255 363 EFFEVANDVIPNLLKEA                   HHHHHHHHHHHHHHHHH c1cR-4 uniq 0.048 0.084 0.196 boundary MID|Menin; 0.0
31 fp_D O00255 371 VIPNLLKEAASLLE                HHHHHHHHHHHHHH c3-AT uniq 0.257 0.198 0.31 boundary MID|Menin; 0.0
32 fp_D O00255 430 PVLHVGWATFLVQS                CEEEEHHHHHHHHH c3-AT multi-selected 0.011 0.141 0.343 boundary MID|Menin; 0.286
33 fp_D O00255 433 HVGWATFLVQSLGR                EEHHHHHHHHHHCC c3-AT multi-selected 0.013 0.135 0.346 boundary MID|Menin; 0.0
34 fp_D O00255 443 SLGRFEGQVRQKVRIVS                   HHCCCCHHHHHEEEEEE c1c-5 uniq 0.049 0.284 0.433 DISO MID|Menin; 0.125
35 fp_D O00255 554 QSEKMKGMKELLVAT                 CHHHHHCCHHHHHHC c1b-4 uniq 0.441 0.816 0.619 DISO MID|Menin; 0.0
36 fp_D O00255 566 VATKINSSAIKLQLTA                  HHCCCCCCCCEEEEEC c1a-AT-4 uniq 0.626 0.728 0.57 DISO MID|Menin; 0.143
37 fp_beta_D O00255 573 SAIKLQLTAQSQVQMKK                   CCCEEEEECCCEEEECC c1c-AT-4 uniq 0.763 0.66 0.649 DISO boundary|Menin; 0.625

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment