O00401 | Neural Wiskott-Aldrich syndrome protein   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D O00401 10 PPRRVTNVGSLLLTP                 CCCCCCCCCCCCCCH c1b-4 multi-selected 0.872 0.573 0.427 boundary boundary|EVH1_WASP-like; 0.0
2 fp_D O00401 11 PRRVTNVGSLLLTP                CCCCCCCCCCCCCH c2-AT-4 multi-selected 0.864 0.549 0.418 boundary boundary|EVH1_WASP-like; 0.0
3 fp_D O00401 106 YFHTFAGDTCQVALNF                  EEEEECCCCCEEECCC c1a-AT-5 uniq 0.166 0.01 0.214 boundary boundary|EVH1_WASP-like; 0.286
4 fp_D O00401 153 NGPNLPMATVDIKN                CCCCCCCCCCCCCC c2-4 uniq 0.922 0.907 0.655 DISO boundary|EVH1_WASP-like; 0.0
5 cand_D O00401 221 TGFDLNNLDPELKNLF     +++++++++++  CCCCCCCCCHHHHHHH c1aR-5 multi-selected 0.166 0.376 0.65 DISO boundary|PBD; 0.0
6 cand_D O00401 224 DLNNLDPELKNLFD  +++++++++++   CCCCCCHHHHHHHH c3-4 multi-selected 0.13 0.344 0.636 DISO MID|PBD; 0.0
7 cand_D O00401 224 DLNNLDPELKNLFDMCG  +++++++++++      CCCCCCHHHHHHHHHCC c1c-5 multi-selected 0.129 0.343 0.646 DISO boundary|PBD; 0.0
8 fp_D O00401 254 VIYDFIEKTGGVEA                HHHHHHHHCCCCHH c3-AT uniq 0.151 0.347 0.652 DISO boundary|PBD; 0.0
9 fp_D O00401 433 GRDALLDQIRQGIQLKS                   CCCCCCCCCCCCCCCCC c1c-4 multi-selected 0.929 0.881 0.82 DISO 0.0
10 fp_D O00401 434 RDALLDQIRQGIQLKS                  CCCCCCCCCCCCCCCC c1d-4 multi 0.926 0.877 0.816 DISO 0.0
11 fp_D O00401 460 TPAPTSGIVGALMEVMQ                   CCCCCCCHHHHHHHHHH c1c-AT-4 uniq 0.801 0.719 0.837 DISO 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment