O35864 | COP9 signalosome complex subunit 5   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D O35864 53 KYCKISALALLKMVMHA                   EEEEEHHHHHHHHHHHH c1c-AT-4 multi 0.009 0.016 0.049 boundary boundary|MPN_RPN11_CSN5; 0.125
2 fp_D O35864 53 KYCKISALALLKMVM                 EEEEEHHHHHHHHHH c1b-4 multi 0.009 0.015 0.042 boundary boundary|MPN_RPN11_CSN5; 0.143
3 fp_D O35864 55 CKISALALLKMVMHA                 EEEHHHHHHHHHHHH c1b-AT-4 multi 0.009 0.015 0.05 boundary boundary|MPN_RPN11_CSN5; 0.0
4 fp_D O35864 56 KISALALLKMVMHA                EEHHHHHHHHHHHH c2-5 multi-selected 0.009 0.015 0.052 boundary boundary|MPN_RPN11_CSN5; 0.0
5 fp_beta_O O35864 71 SGGNLEVMGLMLGK                CCCCEEEEEEEEEE c2-4 multi-selected 0.01 0.016 0.161 ORD MID|MPN_RPN11_CSN5; 0.857
6 fp_beta_D O35864 74 NLEVMGLMLGKVDG                CEEEEEEEEEEEEC c3-4 multi-selected 0.01 0.013 0.159 boundary MID|MPN_RPN11_CSN5; 1.0
7 fp_beta_D O35864 81 MLGKVDGETMIIMD                EEEEEECCEEEEEE c3-AT multi 0.01 0.013 0.118 boundary MID|MPN_RPN11_CSN5; 0.714
8 fp_beta_D O35864 85 VDGETMIIMDSFALPV                  EECCEEEEEEEEECCC c1a-AT-4 multi 0.02 0.017 0.165 boundary MID|MPN_RPN11_CSN5; 1.0
9 fp_beta_D O35864 85 VDGETMIIMDSFALPV                  EECCEEEEEEEEECCC c1d-AT-4 multi 0.02 0.017 0.165 boundary MID|MPN_RPN11_CSN5; 1.0
10 fp_beta_D O35864 86 DGETMIIMDSFALPV                 ECCEEEEEEEEECCC c1b-4 multi 0.021 0.017 0.169 boundary MID|MPN_RPN11_CSN5; 1.0
11 fp_beta_D O35864 87 GETMIIMDSFALPV                CCEEEEEEEEECCC c2-4 multi-selected 0.021 0.016 0.176 boundary MID|MPN_RPN11_CSN5; 1.0
12 fp_beta_D O35864 88 ETMIIMDSFALPVEGTE                   CEEEEEEEEECCCCCCC c1cR-4 multi 0.059 0.074 0.21 boundary MID|MPN_RPN11_CSN5; 0.75
13 fp_beta_D O35864 89 TMIIMDSFALPVEGTE                  EEEEEEEEECCCCCCC c1aR-4 multi-selected 0.062 0.077 0.22 boundary MID|MPN_RPN11_CSN5; 0.714
14 fp_O O35864 146 WLSGIDVSTQMLNQ                CCCCCHHHHHHHHH c3-AT uniq 0.01 0.024 0.115 ORD MID|MPN_RPN11_CSN5; 0.0
15 fp_D O35864 157 LNQQFQEPFVAVVIDP                  HHHHHCCCCEEEEECC c1a-4 uniq 0.01 0.018 0.175 boundary MID|MPN_RPN11_CSN5; 0.286
16 fp_D O35864 165 FVAVVIDPTRTISA                CEEEEECCCCCCCC c3-AT uniq 0.015 0.066 0.171 boundary MID|MPN_RPN11_CSN5; 0.429
17 fp_D O35864 172 PTRTISAGKVNLGA                CCCCCCCCCEEEEE c2-AT-4 uniq 0.016 0.077 0.195 boundary MID|MPN_RPN11_CSN5; 0.143
18 fp_D O35864 204 QTIPLNKIEDFGVHC                 CCCCCCHHHHCCCCC c1b-4 uniq 0.085 0.122 0.236 boundary MID|MPN_RPN11_CSN5; 0.0
19 fp_D O35864 222 YALEVSYFKSSLDRKL            ++++* EEEECCCCCCHHHHHH c1aR-4 uniq 0.016 0.032 0.046 boundary MID|MPN_RPN11_CSN5; 0.0
20 fp_D O35864 311 TIEAIHGLMSQVIK                HHHHHHHHHHHHHH c3-4 uniq 0.058 0.425 0.159 DISO boundary|MPN_RPN11_CSN5; 0.0
21 fp_D O35864 319 MSQVIKDKLFNQINVAX                   HHHHHHHHHCCCCCCC c1c-4 uniq 0.196 0.529 0.101 DISO boundary|MPN_RPN11_CSN5; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment