O54943 | Period circadian protein homolog 2   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D O54943 20 APQPTQAVLQEDVDMSS                   CCCCCCCCCCCCCCCCC c1c-AT-4 uniq 0.972 0.969 0.891 DISO 0.0
2 fp_D O54943 105 AHKELIRTLKELKVHL                  HHHHHHHHHHHHHHCC c1a-4 multi-selected 0.46 0.553 0.458 DISO 0.0
3 fp_D O54943 105 AHKELIRTLKELKVHL                  HHHHHHHHHHHHHHCC c1d-AT-4 multi 0.46 0.553 0.458 DISO 0.0
4 fp_D O54943 106 HKELIRTLKELKVHL                 HHHHHHHHHHHHHCC c1b-4 multi 0.449 0.546 0.454 DISO 0.0
5 fp_D O54943 132 TLATLKYALRSVKQ                HHHHHHHHHHHHHH c3-4 multi-selected 0.291 0.5 0.27 DISO 0.0
6 fp_D O54943 135 TLKYALRSVKQVKA                HHHHHHHHHHHHHC c3-AT multi 0.331 0.471 0.236 DISO 0.0
7 fp_D O54943 180 TSEYIVKNADMFAVAV                  CCCCCCCCCCEEEEEE c1a-AT-4 multi-selected 0.18 0.065 0.102 boundary 0.143
8 fp_D O54943 181 SEYIVKNADMFAVAV                 CCCCCCCCCEEEEEE c1b-AT-4 multi 0.17 0.058 0.092 boundary 0.286
9 fp_beta_D O54943 184 IVKNADMFAVAVSL                CCCCCCEEEEEEEE c2-AT-5 multi 0.107 0.036 0.067 boundary 0.571
10 fp_beta_D O54943 184 IVKNADMFAVAVSLVS                  CCCCCCEEEEEEEECC c1d-AT-5 multi 0.098 0.034 0.063 boundary 0.714
11 fp_beta_D O54943 186 KNADMFAVAVSLVS                CCCCEEEEEEEECC c2-AT-4 multi 0.074 0.027 0.053 boundary 0.857
12 fp_beta_D O54943 194 AVSLVSGKILYISN                EEEECCCEEEEECC c3-4 uniq 0.056 0.019 0.03 boundary 0.571
13 fp_D O54943 201 KILYISNQVASIFH                EEEEECCCHHHHCC c3-4 uniq 0.085 0.025 0.035 boundary 0.286
14 fp_D O54943 216 KKDAFSDAKFVEFLA                 CCCCCCCCCEEEEEC c1b-AT-4 uniq 0.039 0.04 0.054 boundary 0.286
15 fp_D O54943 298 EQQGAESQLCCLLLAE                  CCCCCCCCEEEEEEEE c1a-AT-4 uniq 0.096 0.078 0.115 boundary 0.429
16 cand_D O54943 456 SVQELTEQIHRLLMQP ........*..*.*   HHHHHHHHHHHHHCCC c1a-5 multi-selected 0.238 0.471 0.654 DISO boundary|PAS_3; boundary|FtsK superfamily; 0.0
17 cand_D O54943 457 VQELTEQIHRLLMQP .......*..*.*   HHHHHHHHHHHHCCC c1b-AT-4 multi 0.219 0.447 0.643 DISO boundary|PAS_3; boundary|FtsK superfamily; 0.0
18 fp_D O54943 586 QISCLDSVIRYLES                HHCCHHHHHHHHHH c3-4 uniq 0.442 0.843 0.231 DISO MID|FtsK superfamily; 0.0
19 fp_D O54943 640 SHTEVSAHLSSLTLPG                  CCCCCCCCCCCCCCCC c1a-4 multi-selected 0.957 0.974 0.509 DISO MID|FtsK superfamily; 0.0
20 fp_D O54943 642 TEVSAHLSSLTLPG                CCCCCCCCCCCCCC c2-AT-4 multi 0.954 0.973 0.493 DISO MID|FtsK superfamily; 0.0
21 fp_D O54943 649 SSLTLPGKAESVVSLTS                   CCCCCCCCCCCCCCCCC c1c-AT-4 uniq 0.934 0.97 0.384 DISO MID|FtsK superfamily; 0.0
22 fp_beta_D O54943 890 FAAPLAPVMAFMLPS                 CCCCCCCEEEECCCC c1b-4 multi-selected 0.225 0.5 0.246 DISO MID|FtsK superfamily; MID|Atrophin-1 superfamily; 0.571
23 fp_beta_D O54943 891 AAPLAPVMAFMLPS                CCCCCCEEEECCCC c2-AT-4 multi-selected 0.209 0.5 0.241 DISO MID|FtsK superfamily; MID|Atrophin-1 superfamily; 0.571
24 fp_D O54943 954 CACPVTPPAGTVALGR                  CCCCCCCCCCCCCCCC c1a-AT-4 uniq 0.981 0.914 0.558 DISO boundary|FtsK superfamily; MID|Atrophin-1 superfamily; 0.0
25 fp_D O54943 979 GSSPLQLNLLQLEE                CCCHHHHCCCCCCC c2-4 uniq 0.968 0.877 0.627 DISO boundary|FtsK superfamily; MID|Atrophin-1 superfamily; 0.0
26 fp_D O54943 1042 DAISTSSDLLNLLLGE                  CCCCCCCCCCCCCCCC c1a-AT-4 uniq 0.89 0.856 0.438 DISO boundary|Atrophin-1 superfamily; boundary|Period_C; 0.0
27 fp_D O54943 1137 PIWLLMANTDDSIMMTY                   CCEEECCCCCCCCEEEE c1c-AT-5 multi-selected 0.112 0.098 0.316 boundary MID|Period_C; 0.125
28 fp_D O54943 1138 IWLLMANTDDSIMMTY                  CEEECCCCCCCCEEEE c1d-AT-4 multi 0.106 0.096 0.322 boundary MID|Period_C; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment