*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)
# | candidates | id | start# | sequence | secondary | class | multi-pattern | diso | spotd | iup | loc_DISO | loc_CDD | beta |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | fp_D | O60729 | 44 | PQDDVYLDITDRLCFAI                   | CCCCCEEECCCCEEEEE | c1c-4 | multi-selected | 0.108 | 0.116 | 0.195 | boundary | boundary|DSPn; | 0.375 |
2 | fp_D | O60729 | 46 | DDVYLDITDRLCFAI                 | CCCEEECCCCEEEEE | c1b-AT-4 | multi | 0.051 | 0.053 | 0.14 | boundary | boundary|DSPn; | 0.429 |
3 | fp_O | O60729 | 64 | RPKSASNVHYFSIDN                 | CCCCCCCCEEEECCC | c1b-AT-4 | uniq | 0.017 | 0.04 | 0.123 | ORD | boundary|DSPn; | 0.429 |
4 | fp_O | O60729 | 100 | YCCKINKKLKSITMLR                  | HHHHHHHHHCCCCCCC | c1a-4 | uniq | 0.018 | 0.043 | 0.043 | ORD | MID|DSPn; | 0.0 |
5 | fp_O | O60729 | 110 | SITMLRKKIVHFTG                | CCCCCCCEEEEEEC | c3-4 | uniq | 0.017 | 0.048 | 0.15 | ORD | MID|DSPn; | 0.429 |
6 | fp_O | O60729 | 128 | KQANAAFLVGCYMVIYL                   | HHHHHHHHHHHHHHHHC | c1c-AT-4 | multi-selected | 0.01 | 0.009 | 0.027 | ORD | MID|DSPn; | 0.0 |
7 | fp_O | O60729 | 129 | QANAAFLVGCYMVIYL                  | HHHHHHHHHHHHHHHC | c1d-AT-4 | multi | 0.01 | 0.009 | 0.025 | ORD | MID|DSPn; | 0.0 |
8 | fp_O | O60729 | 132 | AAFLVGCYMVIYLGRTP                   | HHHHHHHHHHHHCCCCH | c1cR-4 | multi | 0.01 | 0.01 | 0.017 | ORD | MID|DSPn; | 0.0 |
9 | fp_O | O60729 | 190 | MQYGFLNFNSFNLDE                 | HHCCCCCCCCCCHHH | c1b-4 | multi | 0.01 | 0.037 | 0.04 | ORD | boundary|DSPn; | 0.0 |
10 | fp_O | O60729 | 191 | QYGFLNFNSFNLDE                | HCCCCCCCCCCHHH | c2-4 | multi-selected | 0.01 | 0.039 | 0.043 | ORD | boundary|DSPn; | 0.0 |
11 | fp_O | O60729 | 288 | GSTPTDAIVKEFLDICE                   | CCCCCHHHHHHHHHHHH | c1c-AT-4 | uniq | 0.028 | 0.022 | 0.148 | ORD | MID|PTPc superfamily; | 0.0 |
12 | fp_O | O60729 | 298 | EFLDICENAEGAIAVHC                   | HHHHHHHCCCCEEEEEC | c1c-AT-5 | uniq | 0.01 | 0.015 | 0.144 | ORD | MID|PTPc superfamily; | 0.125 |
13 | cand_D | O60729 | 389 | AFSKLLSGVDDISING     ++++++++++   | CCCCCCCCCCCCCCCC | c1a-5 | multi-selected | 0.421 | 0.631 | 0.359 | DISO | boundary|PTPc superfamily; | 0.0 |
14 | cand_D | O60729 | 390 | FSKLLSGVDDISING    ++++++++++   | CCCCCCCCCCCCCCC | c1b-4 | multi | 0.411 | 0.624 | 0.351 | DISO | boundary|PTPc superfamily; | 0.0 |
*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment