O96018 | Amyloid beta A4 precursor protein-binding family A member 3   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 cand_D O96018 56 SLQELVQQFEALPGDLVG ++++**++++++++++++ HHHHHHHHHHCCCCCCCC c4-5 multi-selected 0.758 0.673 0.748 DISO 0.0
2 cand_D O96018 56 SLQELVQQFEALPG ++++**++++++++ HHHHHHHHHHCCCC c3-4 multi-selected 0.763 0.658 0.733 DISO 0.0
3 fp_beta_D O96018 215 LLDGVIFGARYLGS                CCCCEEEEEECCCC c3-AT uniq 0.067 0.269 0.429 DISO boundary|Trypan_PARP superfamily; boundary|PTB_X11; 0.857
4 fp_D O96018 242 RMAQAREAMDRVKA                HHHHHHHHHCCCCC c3-AT uniq 0.661 0.486 0.807 DISO MID|PTB_X11; 0.0
5 fp_D O96018 256 PDGETQPMTEVDLFV                 CCCCCCCCCCCCCCC c1b-AT-4 uniq 0.481 0.395 0.563 DISO MID|PTB_X11; 0.0
6 fp_D O96018 264 TEVDLFVSTKRIKVLT                  CCCCCCCCCCCCCCCC c1a-AT-4 multi-selected 0.346 0.265 0.388 boundary MID|PTB_X11; 0.0
7 fp_D O96018 265 EVDLFVSTKRIKVLT                 CCCCCCCCCCCCCCC c1b-AT-5 multi 0.34 0.26 0.371 boundary MID|PTB_X11; 0.0
8 fp_D O96018 266 VDLFVSTKRIKVLT                CCCCCCCCCCCCCC c2-AT-4 multi 0.334 0.255 0.359 boundary MID|PTB_X11; 0.0
9 fp_D O96018 293 TISYTADIGCVLVLMA                  CCEEECCCCCEEEEEE c1d-AT-5 multi 0.043 0.048 0.124 boundary MID|PTB_X11; 0.286
10 fp_D O96018 293 TISYTADIGCVLVLM                 CCEEECCCCCEEEEE c1b-AT-5 multi 0.041 0.049 0.117 boundary MID|PTB_X11; 0.286
11 fp_D O96018 294 ISYTADIGCVLVLM                CEEECCCCCEEEEE c2-AT-4 multi-selected 0.037 0.048 0.108 boundary MID|PTB_X11; 0.286
12 fp_O O96018 443 RLTAINGTSLVGLPL                 EEEEECCCCCCCCCH c1b-AT-5 multi 0.01 0.033 0.169 ORD boundary|PDZ; 0.143
13 fp_O O96018 446 AINGTSLVGLPLAA                EECCCCCCCCCHHH c2-AT-5 multi-selected 0.011 0.035 0.168 ORD boundary|PDZ; 0.0
14 fp_beta_D O96018 497 LGFCVEDGIICSLLRGG                   CCCEECCCEEEECCCCC c1cR-4 uniq 0.041 0.028 0.073 boundary boundary|PDZ; boundary|PDZ_signaling; 0.625
15 fp_D O96018 541 RIIELLTEAYGEVHIKT                   HHHHHHHHCCCEEEEEE c1c-AT-5 multi-selected 0.017 0.023 0.165 boundary boundary|PDZ_signaling; 0.125
16 fp_D O96018 542 IIELLTEAYGEVHIKT                  HHHHHHHCCCEEEEEE c1d-AT-5 multi 0.017 0.022 0.164 boundary boundary|PDZ_signaling; 0.143
17 fp_D O96018 554 HIKTMPAATYRLLT                EEEECCCHHHHHHH c3-AT uniq 0.035 0.051 0.236 boundary boundary|PDZ_signaling; 0.143

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment