P02554 | Tubulin beta chain   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 cand_D P02554 38 GDSDLQLERINVYY    ++++++++++  CCCCCCCCCEEEEE c2-4 uniq 0.119 0.155 0.308 boundary MID|PLN00220; 0.143
2 fp_beta_D P02554 56 GNKYVPRAILVDLEP                 CCCCCCCEEEECCCC c1b-AT-4 uniq 0.013 0.032 0.268 boundary MID|PLN00220; 0.571
3 fp_O P02554 106 YTEGAELVDSVLDVVR                  CCCCHHHHHHHHHHHH c1d-AT-4 uniq 0.019 0.031 0.296 ORD MID|PLN00220; 0.0
4 fp_D P02554 139 LGGGTGSGMGTLLISK                  CCCCCCCCHHHHHHHH c1a-AT-4 uniq 0.017 0.089 0.322 boundary MID|PLN00220; 0.0
5 fp_D P02554 198 ETYCIDNEALYDICFRT                   EEEEECHHHHHHHHHHC c1c-AT-4 uniq 0.136 0.011 0.111 boundary MID|PLN00220; 0.125
6 fp_D P02554 206 ALYDICFRTLKLTT                HHHHHHHHCCCCCC c2-5 multi-selected 0.143 0.024 0.082 boundary MID|PLN00220; 0.0
7 fp_D P02554 206 ALYDICFRTLKLTT                HHHHHHHHCCCCCC c3-AT multi 0.143 0.024 0.082 boundary MID|PLN00220; 0.0
8 fp_D P02554 228 LVSATMSGVTTCLRFPG                   HHHHHHCCCCCCCCCCC c1c-AT-5 multi-selected 0.316 0.05 0.228 boundary MID|PLN00220; 0.0
9 fp_D P02554 229 VSATMSGVTTCLRFPG                  HHHHHCCCCCCCCCCC c1a-AT-4 multi-selected 0.331 0.051 0.218 boundary MID|PLN00220; 0.0
10 fp_D P02554 229 VSATMSGVTTCLRFPG                  HHHHHCCCCCCCCCCC c1d-4 multi 0.331 0.051 0.218 boundary MID|PLN00220; 0.0
11 fp_D P02554 242 FPGQLNADLRKLAVNM                  CCCCCCCCHHHHHCCC c1a-4 multi-selected 0.126 0.07 0.175 boundary MID|PLN00220; 0.0
12 fp_D P02554 244 GQLNADLRKLAVNM                CCCCCCHHHHHCCC c2-AT-4 multi 0.081 0.071 0.165 boundary MID|PLN00220; 0.0
13 fp_O P02554 309 RYLTVAAVFRGRMSMKE                   CCCCCCCCCCCCCCHHH c1c-4 multi-selected 0.018 0.045 0.203 ORD MID|PLN00220; 0.0
14 fp_O P02554 310 YLTVAAVFRGRMSMKE                  CCCCCCCCCCCCCHHH c1d-AT-5 multi 0.018 0.046 0.209 ORD MID|PLN00220; 0.0
15 fp_O P02554 319 GRMSMKEVDEQMLNVQ                  CCCCHHHHHHHHHHHH c1aR-5 multi-selected 0.046 0.089 0.318 ORD MID|PLN00220; 0.0
16 fp_O P02554 322 SMKEVDEQMLNVQN                CHHHHHHHHHHHHH c3-4 multi-selected 0.052 0.094 0.337 ORD MID|PLN00220; 0.0
17 fp_D P02554 377 LFKRISEQFTAMFR                HHHHHHHHHHHHHH c3-4 uniq 0.031 0.021 0.175 boundary MID|PLN00220; 0.0
18 fp_D P02554 395 LHWYTGEGMDEMEFTE                  CCCCCCCCCCCCCCCH c1a-AT-4 uniq 0.701 0.168 0.36 boundary boundary|PLN00220; 0.0
19 fp_D P02554 407 EFTEAESNMNDLVS                CCCHHHHHHHHHHH c3-AT uniq 0.632 0.295 0.514 DISO boundary|PLN00220; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment