P04014 | Replication protein E1   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D P04014 91 YVSPISNVANAVES                CCCCCCCCCCCCCC c3-AT uniq 0.706 0.765 0.515 DISO MID|PHA02774; 0.0
2 cand_D P04014 102 VESEISPRLDAIKLTT     ++++*++*++   CCCCCCCCCCEEECCC c1a-4 uniq 0.523 0.731 0.507 DISO MID|PHA02774; 0.143
3 fp_D P04014 204 IRSTLHGKFKDCFGLSF                   HHHHHHHHHHHHHCCCC c1c-4 uniq 0.01 0.04 0.075 boundary MID|PHA02774; 0.0
4 fp_O P04014 212 FKDCFGLSFVDLIR                HHHHHCCCCCCCCC c2-4 multi-selected 0.013 0.041 0.069 ORD MID|PHA02774; 0.0
5 fp_O P04014 212 FKDCFGLSFVDLIRPFKS                    HHHHHCCCCCCCCCCCCC c4-4 multi 0.017 0.047 0.075 ORD MID|PHA02774; 0.0
6 fp_O P04014 216 FGLSFVDLIRPFKSDR                  HCCCCCCCCCCCCCCC c1aR-4 multi-selected 0.02 0.055 0.08 ORD MID|PHA02774; 0.0
7 fp_beta_O P04014 231 RTTCADWVVAGFGIHH                  CCCCCCCEEEECCCCH c1a-AT-4 multi-selected 0.011 0.025 0.113 ORD MID|PHA02774; 0.571
8 fp_beta_O P04014 231 RTTCADWVVAGFGIHH                  CCCCCCCEEEECCCCH c1d-AT-4 multi 0.011 0.025 0.113 ORD MID|PHA02774; 0.571
9 fp_O P04014 240 AGFGIHHSIADAFQKLI                   EECCCCHHHHHHHHHHH c1cR-5 multi 0.009 0.014 0.081 ORD MID|PHA02774; 0.0
10 fp_O P04014 244 IHHSIADAFQKLIEPLSL                    CCHHHHHHHHHHHHCCCC c4-4 multi-selected 0.01 0.012 0.064 ORD MID|PHA02774; 0.0
11 fp_beta_O P04014 267 WLTNAWGMVLLVLIRF                  EECCCCCEEEEEEEEC c1a-AT-5 multi 0.01 0.009 0.013 ORD MID|PHA02774; 0.571
12 fp_beta_O P04014 267 WLTNAWGMVLLVLIRF                  EECCCCCEEEEEEEEC c1d-AT-5 multi 0.01 0.009 0.013 ORD MID|PHA02774; 0.571
13 fp_beta_O P04014 267 WLTNAWGMVLLVLIR                 EECCCCCEEEEEEEE c1b-AT-5 multi 0.01 0.009 0.013 ORD MID|PHA02774; 0.571
14 fp_beta_O P04014 270 NAWGMVLLVLIRFKVNK                   CCCCEEEEEEEECCCCC c1c-4 multi-selected 0.01 0.014 0.015 ORD MID|PHA02774; 1.0
15 fp_beta_O P04014 270 NAWGMVLLVLIRFKV                 CCCCEEEEEEEECCC c1b-4 multi 0.01 0.011 0.014 ORD MID|PHA02774; 1.0
16 fp_beta_O P04014 271 AWGMVLLVLIRFKVNK                  CCCEEEEEEEECCCCC c1a-4 multi-selected 0.01 0.014 0.015 ORD MID|PHA02774; 1.0
17 fp_beta_O P04014 271 AWGMVLLVLIRFKVNK                  CCCEEEEEEEECCCCC c1d-4 multi 0.01 0.014 0.015 ORD MID|PHA02774; 1.0
18 fp_beta_O P04014 271 AWGMVLLVLIRFKV                CCCEEEEEEEECCC c2-4 multi-selected 0.01 0.011 0.015 ORD MID|PHA02774; 1.0
19 fp_beta_O P04014 272 WGMVLLVLIRFKVNKSR                   CCEEEEEEEECCCCCCH c1cR-4 multi 0.01 0.016 0.018 ORD MID|PHA02774; 0.75
20 fp_beta_O P04014 272 WGMVLLVLIRFKVNK                 CCEEEEEEEECCCCC c1b-4 multi 0.01 0.014 0.016 ORD MID|PHA02774; 0.857
21 fp_beta_O P04014 273 GMVLLVLIRFKVNK                CEEEEEEEECCCCC c2-5 multi-selected 0.01 0.013 0.016 ORD MID|PHA02774; 0.857
22 fp_beta_O P04014 273 GMVLLVLIRFKVNKSR                  CEEEEEEEECCCCCCH c1aR-4 multi-selected 0.01 0.016 0.019 ORD MID|PHA02774; 0.714
23 fp_O P04014 287 SRCTVARTLGTLLNIPE                   CHHHHHHHHHHHCCCCC c1c-4 multi-selected 0.01 0.02 0.122 ORD MID|PHA02774; 0.0
24 fp_O P04014 288 RCTVARTLGTLLNIPE                  HHHHHHHHHHHCCCCC c1d-AT-4 multi 0.01 0.019 0.127 ORD MID|PHA02774; 0.0
25 fp_O P04014 290 TVARTLGTLLNIPE                HHHHHHHHHCCCCC c3-AT multi 0.01 0.017 0.14 ORD MID|PHA02774; 0.0
26 fp_O P04014 412 HYKHAEMKKMSIKQ                HHHHHHHHCCCHHH c2-AT-4 uniq 0.026 0.072 0.109 ORD MID|PHA02774; 0.0
27 fp_O P04014 450 QNIEFIPFLSKLKLWL                  CCCCHHHHHHHHHHHH c1a-4 multi-selected 0.01 0.012 0.033 ORD MID|PHA02774; 0.0
28 fp_O P04014 450 QNIEFIPFLSKLKLWL                  CCCCHHHHHHHHHHHH c1d-4 multi 0.01 0.012 0.033 ORD MID|PHA02774; 0.0
29 fp_O P04014 451 NIEFIPFLSKLKLWL                 CCCHHHHHHHHHHHH c1b-5 multi 0.01 0.012 0.033 ORD MID|PHA02774; 0.0
30 fp_O P04014 454 FIPFLSKLKLWL              HHHHHHHHHHHH c2-rev multi-selected 0.01 0.01 0.035 ORD MID|PHA02774; 0.0
31 fp_O P04014 483 GKSCFCMSLIKFLG                CHHHHHHHHHHHHC c2-4 multi-selected 0.01 0.012 0.028 ORD MID|PHA02774; 0.0
32 fp_O P04014 487 FCMSLIKFLGGTVISYV                   HHHHHHHHHCCCEEEEC c1cR-4 multi 0.01 0.01 0.023 ORD MID|PHA02774; 0.0
33 fp_O P04014 507 SHFWLQPLTDAKVALLD                   CCCCCCCCCCCCEEEEE c1c-AT-4 uniq 0.01 0.013 0.063 ORD MID|PHA02774; 0.0
34 fp_beta_O P04014 559 KCPPLLVTSNIDISK                 CCCCEEEECCCCCCC c1b-AT-4 multi 0.031 0.023 0.124 ORD MID|PHA02774; 0.571
35 fp_beta_O P04014 560 CPPLLVTSNIDISK                CCCEEEECCCCCCC c2-AT-4 multi-selected 0.029 0.023 0.124 ORD MID|PHA02774; 0.571
36 fp_O P04014 576 KYKYLHSRVTTFTFPN                  CCCCCCCCEEEEECCC c1a-4 uniq 0.022 0.019 0.168 ORD MID|PHA02774; 0.429
37 fp_D P04014 609 NWKCFFERLSSSLDIED                   CHHHHHHHHHHCCCCCC c1c-4 multi-selected 0.15 0.143 0.205 boundary MID|PHA02774; 0.0
38 fp_D P04014 610 WKCFFERLSSSLDIED                  HHHHHHHHHHCCCCCC c1d-4 multi 0.159 0.148 0.213 boundary MID|PHA02774; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment