P05928 | Protein Vpr   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D P05928 49 TYGDTWAGVEAIIRILQ                *  HCCCHHHHHHHHHHHHH c1c-AT-4 uniq 0.01 0.048 0.097 boundary boundary|VPR; 0.0
2 cand_D P05928 55 AGVEAIIRILQQLLFIH          *  **    HHHHHHHHHHHHHHHHH c1c-AT-4 multi 0.01 0.041 0.048 boundary boundary|VPR; 0.0
3 cand_D P05928 56 GVEAIIRILQQLLFIHF         *  **     HHHHHHHHHHHHHHHHC c1c-5 multi 0.011 0.042 0.046 boundary boundary|VPR; 0.0
4 cand_D P05928 56 GVEAIIRILQQLLFIH         *  **    HHHHHHHHHHHHHHHH c1a-5 multi-selected 0.01 0.04 0.045 boundary boundary|VPR; 0.0
5 cand_D P05928 56 GVEAIIRILQQLLFIH         *  **    HHHHHHHHHHHHHHHH c1d-5 multi 0.01 0.04 0.045 boundary boundary|VPR; 0.0
6 cand_D P05928 57 VEAIIRILQQLLFIHF        *  **     HHHHHHHHHHHHHHHC c1d-4 multi 0.011 0.042 0.043 boundary boundary|VPR; 0.0
7 cand_D P05928 57 VEAIIRILQQLLFIH        *  **    HHHHHHHHHHHHHHH c1b-4 multi 0.01 0.04 0.042 boundary boundary|VPR; 0.0
8 cand_D P05928 59 AIIRILQQLLFIHFRI      *  **       HHHHHHHHHHHHHCCC c1a-5 multi-selected 0.012 0.055 0.037 boundary boundary|VPR; 0.0
9 cand_D P05928 60 IIRILQQLLFIHFRIGC     *  **         HHHHHHHHHHHHCCCCC c1c-5 multi 0.016 0.079 0.046 boundary boundary|VPR; 0.0
10 cand_D P05928 60 IIRILQQLLFIHFRI     *  **       HHHHHHHHHHHHCCC c1b-5 multi 0.013 0.056 0.036 boundary boundary|VPR; 0.0
11 fp_D P05928 63 ILQQLLFIHFRIGC  *  **         HHHHHHHHHCCCCC c2-5 multi 0.017 0.088 0.047 boundary boundary|VPR; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment