P06748 | Nucleophosmin   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 cand_beta_D P06748 38 NEHQLSLRTVSLGA     *+*+++++   CCCEEEEEEEECCC c2-4 uniq 0.036 0.049 0.488 boundary boundary|Nucleoplasmin; 1.0
2 fp_D P06748 45 RTVSLGAGAKDELHIVE +++++           * EEEECCCCCCCCCEEEE c1c-AT-4 uniq 0.036 0.053 0.443 boundary MID|Nucleoplasmin; 0.0
3 fp_beta_D P06748 68 EGSPIKVTLATLKMSV                  CCCCEEEEEEEEECCC c1a-4 multi-selected 0.06 0.045 0.423 boundary MID|Nucleoplasmin; 1.0
4 fp_beta_D P06748 68 EGSPIKVTLATLKMSV                  CCCCEEEEEEEEECCC c1d-AT-4 multi 0.06 0.045 0.423 boundary MID|Nucleoplasmin; 1.0
5 fp_beta_D P06748 70 SPIKVTLATLKMSV                CCEEEEEEEEECCC c2-4 multi-selected 0.054 0.037 0.429 __ MID|Nucleoplasmin; 1.0
6 fp_beta_D P06748 70 SPIKVTLATLKMSVQP                  CCEEEEEEEEECCCCC c1a-AT-4 multi 0.053 0.039 0.423 __ MID|Nucleoplasmin; 1.0
7 fp_beta_D P06748 70 SPIKVTLATLKMSVQP                  CCEEEEEEEEECCCCC c1d-AT-4 multi 0.053 0.039 0.423 __ MID|Nucleoplasmin; 1.0
8 fp_beta_O P06748 72 IKVTLATLKMSVQP                EEEEEEEEECCCCC c2-AT-4 multi 0.046 0.035 0.423 ORD MID|Nucleoplasmin; 0.857
9 fp_beta_O P06748 72 IKVTLATLKMSVQPTV                  EEEEEEEEECCCCCCE c1aR-4 multi-selected 0.045 0.036 0.433 ORD MID|Nucleoplasmin; 0.714
10 cand_O P06748 82 SVQPTVSLGGFEITP             *++ CCCCCEECCCCEECC c1b-AT-5 multi 0.031 0.043 0.425 ORD boundary|Nucleoplasmin; 0.286
11 cand_O P06748 83 VQPTVSLGGFEITP            *++ CCCCEECCCCEECC c2-4 multi-selected 0.03 0.043 0.433 ORD boundary|Nucleoplasmin; 0.286
12 cand_beta_D P06748 91 GFEITPPVVLRLKC    *++*++*+*   CCEECCCEEEEEEE c3-AT uniq 0.018 0.023 0.413 boundary boundary|Nucleoplasmin; 0.571
13 fp_D P06748 264 VEAKFINYVKNCFRMTD                   HHHHHHHHHHHCCCCCC c1c-4 multi-selected 0.061 0.073 0.422 boundary small|NPM1-C; 0.0
14 fp_D P06748 265 EAKFINYVKNCFRMTD                  HHHHHHHHHHCCCCCC c1d-4 multi 0.043 0.071 0.416 boundary small|NPM1-C; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment