P10188 | Nuclear protein UL4   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D P10188 19 LTSALPDAAQVVHVFE                  CCCCCCCCCEEEEEEC c1a-AT-4 multi-selected 0.038 0.096 0.129 boundary boundary|Herpes_UL4; 0.286
2 fp_D P10188 19 LTSALPDAAQVVHVFE                  CCCCCCCCCEEEEEEC c1d-AT-4 multi 0.038 0.096 0.129 boundary boundary|Herpes_UL4; 0.286
3 fp_beta_D P10188 22 ALPDAAQVVHVFEY                CCCCCCEEEEEECC c3-AT multi 0.024 0.069 0.127 boundary boundary|Herpes_UL4; 0.571
4 fp_beta_D P10188 29 VVHVFEYGTRAIMVRG                  EEEEECCCEEEEEECC c1a-AT-5 uniq 0.021 0.03 0.186 boundary MID|Herpes_UL4; 0.571
5 fp_beta_D P10188 57 VIQHTPIGLLVIID                EEEECCCEEEEEEE c2-AT-5 multi-selected 0.01 0.01 0.101 boundary MID|Herpes_UL4; 0.571
6 fp_beta_D P10188 57 VIQHTPIGLLVIID                EEEECCCEEEEEEE c3-AT multi-selected 0.01 0.01 0.101 boundary MID|Herpes_UL4; 0.571
7 fp_beta_D P10188 120 GILTVVWTADTIYITA                  CEEEEEECCCEEEEEE c1a-AT-5 multi-selected 0.01 0.014 0.125 boundary MID|Herpes_UL4; 0.571
8 fp_beta_D P10188 120 GILTVVWTADTIYITA                  CEEEEEECCCEEEEEE c1d-AT-5 multi 0.01 0.014 0.125 boundary MID|Herpes_UL4; 0.571
9 fp_beta_D P10188 121 ILTVVWTADTIYITA                 EEEEEECCCEEEEEE c1b-AT-5 multi 0.01 0.013 0.113 boundary MID|Herpes_UL4; 0.571
10 cand_D P10188 165 GTAEFLQPTADLLVEV              *++ CCCCCCCCCCHHHHHH c1a-AT-4 multi-selected 0.267 0.486 0.317 DISO boundary|Herpes_UL4; 0.0
11 cand_D P10188 166 TAEFLQPTADLLVEVLR             *++*+ CCCCCCCCCHHHHHHHH c1c-AT-4 multi-selected 0.206 0.442 0.291 DISO boundary|Herpes_UL4; 0.0
12 cand_D P10188 166 TAEFLQPTADLLVEV             *++ CCCCCCCCCHHHHHH c1b-AT-4 multi 0.232 0.463 0.295 DISO boundary|Herpes_UL4; 0.0
13 cand_D P10188 169 FLQPTADLLVEVLR          *++*+ CCCCCCHHHHHHHH c3-AT multi 0.11 0.38 0.25 DISO boundary|Herpes_UL4; 0.0
14 cand_D P10188 172 PTADLLVEVLREIQLSP       *++*++*+*   CCCHHHHHHHHHHCCCC c1c-4 multi-selected 0.061 0.354 0.208 DISO boundary|Herpes_UL4; 0.0
15 cand_D P10188 173 TADLLVEVLREIQLSP      *++*++*+*   CCHHHHHHHHHHCCCC c1a-4 multi-selected 0.053 0.346 0.208 DISO boundary|Herpes_UL4; 0.0
16 cand_D P10188 173 TADLLVEVLREIQLSP      *++*++*+*   CCHHHHHHHHHHCCCC c1d-4 multi 0.053 0.346 0.208 DISO boundary|Herpes_UL4; 0.0
17 cand_D P10188 174 ADLLVEVLREIQLSP     *++*++*+*   CHHHHHHHHHHCCCC c1b-4 multi 0.049 0.34 0.203 DISO boundary|Herpes_UL4; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment