P11388 | DNA topoisomerase 2-alpha   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D P11388 2 EVSPLQPVNENMQVNK                  CCCCCCCCCCCCCCCC c1d-5 uniq 0.971 0.834 0.487 DISO boundary|PTZ00108; 0.0
2 fp_D P11388 34 YQKKTQLEHILLRP                HHHCCCCHHHHCCC c2-AT-4 uniq 0.812 0.191 0.199 DISO boundary|PTZ00108; 0.0
3 fp_D P11388 45 LRPDTYIGSVELVT                CCCCCCEECCCCEE c2-AT-4 uniq 0.705 0.068 0.159 boundary boundary|PTZ00108; 0.286
4 fp_beta_D P11388 52 GSVELVTQQMWVYD                ECCCCEEEEEEEEE c2-AT-4 uniq 0.396 0.033 0.135 boundary MID|PTZ00108; 0.714
5 fp_D P11388 77 FVPGLYKIFDEILVNA                  ECCCCCCCCCEEEHHH c1a-5 multi-selected 0.394 0.014 0.114 boundary MID|PTZ00108; 0.143
6 fp_D P11388 77 FVPGLYKIFDEILVNA                  ECCCCCCCCCEEEHHH c1d-5 multi 0.394 0.014 0.114 boundary MID|PTZ00108; 0.143
7 fp_D P11388 124 GIPVVEHKVEKMYVPA                  CCCEEECCCCCCCCCE c1a-5 uniq 0.683 0.016 0.144 boundary MID|PTZ00108; 0.286
8 fp_D P11388 131 KVEKMYVPALIFGQ                CCCCCCCCEEEEEE c3-AT uniq 0.59 0.013 0.094 boundary MID|PTZ00108; 0.286
9 fp_beta_D P11388 165 YGAKLCNIFSTKFTVET                   CCCEEEEECCCEEEEEE c1c-4 uniq 0.132 0.012 0.149 boundary MID|PTZ00108; 0.625
10 fp_D P11388 194 WMDNMGRAGEMELKP                 ECCCCCCCCCCEEEC c1b-AT-5 uniq 0.21 0.064 0.334 boundary MID|PTZ00108; 0.0
11 fp_D P11388 215 TCITFQPDLSKFKMQS                  EEEEEEECCCCCCCCC c1a-4 uniq 0.065 0.026 0.158 boundary MID|PTZ00108; 0.429
12 fp_D P11388 224 SKFKMQSLDKDIVALM                  CCCCCCCCCHHHHHHH c1aR-5 multi 0.084 0.027 0.125 boundary MID|PTZ00108; 0.0
13 fp_D P11388 227 KMQSLDKDIVALMVRR                  CCCCCCHHHHHHHHHH c1a-5 multi-selected 0.074 0.022 0.127 boundary MID|PTZ00108; 0.0
14 fp_D P11388 235 IVALMVRRAYDIAG                HHHHHHHHHHHHHC c3-AT uniq 0.036 0.009 0.116 __ MID|PTZ00108; 0.0
15 fp_D P11388 242 RAYDIAGSTKDVKVFL                  HHHHHHCCCCCCEEEE c1a-AT-4 uniq 0.018 0.014 0.165 __ MID|PTZ00108; 0.0
16 fp_D P11388 260 NKLPVKGFRSYVDMYL                  EECCCCCHHHHHHHHH c1d-4 uniq 0.053 0.046 0.123 boundary MID|PTZ00108; 0.0
17 fp_D P11388 275 LKDKLDETGNSLKVIH                  HCCCCCCCCCCCEEEE c1d-AT-4 multi 0.098 0.1 0.265 boundary MID|PTZ00108; 0.0
18 fp_D P11388 278 KLDETGNSLKVIHE                CCCCCCCCCEEEEE c3-AT multi-selected 0.1 0.102 0.282 boundary MID|PTZ00108; 0.143
19 fp_D P11388 326 VDYVADQIVTKLVDVVK                   HHHHHHHHHHHHHHHHH c1c-AT-4 multi-selected 0.055 0.025 0.16 __ MID|PTZ00108; 0.0
20 fp_D P11388 329 VADQIVTKLVDVVK                HHHHHHHHHHHHHH c2-AT-4 multi 0.058 0.025 0.153 boundary MID|PTZ00108; 0.0
21 fp_D P11388 369 ENPTFDSQTKENMTLQP                   CCCCCCCCCCCCCCCCC c1c-AT-4 uniq 0.661 0.176 0.392 boundary MID|PTZ00108; 0.0
22 fp_D P11388 463 DSAKTLAVSGLGVVG                 CCHHHHHHCCCCCCC c1b-AT-4 multi 0.419 0.063 0.176 DISO MID|PTZ00108; 0.0
23 fp_D P11388 464 SAKTLAVSGLGVVG                CHHHHHHCCCCCCC c2-4 multi-selected 0.418 0.063 0.176 DISO MID|PTZ00108; 0.0
24 fp_D P11388 482 GVFPLRGKILNVRE                EEECCCCCCCCCCC c3-4 uniq 0.602 0.038 0.176 boundary MID|PTZ00108; 0.0
25 fp_D P11388 503 ENAEINNIIKIVGLQY                  HHHHHHHHHHHHCCCC c1a-4 multi-selected 0.119 0.043 0.185 boundary MID|PTZ00108; 0.0
26 fp_D P11388 503 ENAEINNIIKIVGLQY                  HHHHHHHHHHHHCCCC c1d-4 multi 0.119 0.043 0.185 boundary MID|PTZ00108; 0.0
27 fp_beta_D P11388 569 FLEEFITPIVKVSK                CEEEEECCEEEEEE c3-4 uniq 0.099 0.014 0.146 boundary MID|PTZ00108; 0.714
28 fp_D P11388 743 KVAQLAGSVAEMSS                EEEEHHHHHHHHCC c3-4 uniq 0.667 0.063 0.293 boundary MID|PTZ00108; 0.143
29 fp_D P11388 758 HHGEMSLMMTIINLAQ                  CCCCCHHHHHHHHHHH c1a-4 multi-selected 0.435 0.032 0.137 DISO MID|PTZ00108; 0.0
30 fp_D P11388 758 HHGEMSLMMTIINLAQ                  CCCCCHHHHHHHHHHH c1d-4 multi 0.435 0.032 0.137 DISO MID|PTZ00108; 0.0
31 fp_D P11388 760 GEMSLMMTIINLAQ                CCCHHHHHHHHHHH c2-4 multi-selected 0.417 0.028 0.129 DISO MID|PTZ00108; 0.0
32 fp_D P11388 764 LMMTIINLAQNFVG                HHHHHHHHHHCCCC c3-AT multi 0.296 0.023 0.11 DISO MID|PTZ00108; 0.0
33 fp_D P11388 764 LMMTIINLAQNFVGSN                  HHHHHHHHHHCCCCCC c1aR-4 multi-selected 0.278 0.024 0.113 DISO MID|PTZ00108; 0.0
34 fp_D P11388 805 YIFTMLSSLARLLFPPK                   CCCCCCHHHHHCCCCCC c1cR-4 multi 0.11 0.018 0.116 __ MID|PTZ00108; 0.0
35 fp_D P11388 805 YIFTMLSSLARLLFPP                  CCCCCCHHHHHCCCCC c1a-5 multi-selected 0.114 0.018 0.116 boundary MID|PTZ00108; 0.0
36 fp_D P11388 806 IFTMLSSLARLLFP                CCCCCHHHHHCCCC c3-AT multi 0.111 0.017 0.109 boundary MID|PTZ00108; 0.0
37 fp_D P11388 806 IFTMLSSLARLLFPP                 CCCCCHHHHHCCCCC c1b-5 multi 0.107 0.017 0.106 boundary MID|PTZ00108; 0.0
38 fp_beta_D P11388 841 YIPIIPMVLING              CCCCCCEEEECC c2-rev uniq 0.354 0.012 0.092 boundary MID|PTZ00108; 0.5
39 fp_D P11388 865 PNFDVREIVNNIRRLM                  CCCCHHHHHHHHHHHH c1aR-5 multi-selected 0.233 0.023 0.251 DISO MID|PTZ00108; 0.0
40 fp_D P11388 868 DVREIVNNIRRLMD                CHHHHHHHHHHHHC c3-4 multi-selected 0.215 0.022 0.276 DISO MID|PTZ00108; 0.0
41 fp_beta_D P11388 912 EVAILNSTTIEISE                EEEEECCCEEEEEE c3-AT uniq 0.043 0.017 0.181 boundary MID|PTZ00108; 0.571
42 fp_beta_D P11388 958 REYHTDTTVKFVVKMTE                   CCCCCCCEEEEEEEECH c1c-AT-4 uniq 0.05 0.03 0.242 boundary MID|PTZ00108; 0.625
43 fp_D P11388 973 TEEKLAEAERVGLHK                 CHHHHHHHHHCCCCC c1b-AT-4 uniq 0.207 0.048 0.186 boundary MID|PTZ00108; 0.0
44 cand_D P11388 1011 KYDTVLDILRDFFELRL       +++++*++*+* CCCCHHHHHHHHHHHHH c1c-4 multi 0.101 0.014 0.039 boundary MID|PTZ00108; 0.0
45 cand_D P11388 1012 YDTVLDILRDFFELRL      +++++*++*+* CCCHHHHHHHHHHHHH c1d-4 multi 0.105 0.013 0.039 boundary MID|PTZ00108; 0.0
46 cand_D P11388 1014 TVLDILRDFFELRLKY    +++++*++*+*+  CHHHHHHHHHHHHHHH c1a-5 multi-selected 0.14 0.012 0.037 boundary MID|PTZ00108; 0.0
47 cand_D P11388 1015 VLDILRDFFELRLKY   +++++*++*+*+  HHHHHHHHHHHHHHH c1b-5 multi 0.147 0.011 0.035 boundary MID|PTZ00108; 0.0
48 cand_D P11388 1051 QARFILEKIDGKIIIEN    +++++*+++*+++  HHHHHHHHHCCCCCCCC c1c-4 multi-selected 0.092 0.051 0.175 boundary MID|PTZ00108; 0.0
49 cand_D P11388 1052 ARFILEKIDGKIIIEN   +++++*+++*+++  HHHHHHHHCCCCCCCC c1aR-4 multi-selected 0.096 0.052 0.172 boundary MID|PTZ00108; 0.0
50 cand_D P11388 1052 ARFILEKIDGKIIIEN   +++++*+++*+++  HHHHHHHHCCCCCCCC c1d-4 multi 0.096 0.052 0.172 boundary MID|PTZ00108; 0.0
51 fp_D P11388 1170 DLATFIEELEAVEA                HHHHHHHHHHHHHH c3-4 uniq 0.204 0.145 0.482 DISO MID|PTZ00108; 0.0
52 fp_D P11388 1251 DGVELEGLKQRLEKKQ                  CCCCCCHHHHHHHCCC c1aR-4 uniq 0.973 0.909 0.773 DISO MID|PTZ00108; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment