P11484 | Heat shock protein SSB1   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D P11484 1 MAEGVFQGAIGIDLGT                  CCCCCCCCEEEEECCC c1a-AT-4 multi-selected 0.361 0.202 0.153 boundary boundary|HSP70 superfamily; 0.429
2 fp_beta_D P11484 2 AEGVFQGAIGIDLGT                 CCCCCCCEEEEECCC c1b-AT-4 multi 0.325 0.171 0.151 boundary boundary|HSP70 superfamily; 0.571
3 fp_beta_D P11484 87 KDMKTWPFKVIDVDG                 CCCCCCCEEEECCCC c1b-AT-4 uniq 0.047 0.04 0.271 boundary MID|HSP70 superfamily; 0.571
4 fp_beta_D P11484 137 IGKKVEKAVITVPAYFND                    CCCCCCCEEEECCCCCCC c4-4 uniq 0.015 0.04 0.234 boundary MID|HSP70 superfamily; 0.5
5 fp_D P11484 159 ATKDAGAISGLNVLR                 HHCCCCHHCCCEEEE c1b-AT-4 multi 0.052 0.05 0.277 boundary MID|HSP70 superfamily; 0.0
6 fp_D P11484 161 KDAGAISGLNVLRIIN                  CCCCHHCCCEEEEECC c1a-AT-4 multi-selected 0.036 0.041 0.241 boundary MID|HSP70 superfamily; 0.286
7 fp_D P11484 162 DAGAISGLNVLRIIN                 CCCHHCCCEEEEECC c1b-4 multi 0.027 0.039 0.238 boundary MID|HSP70 superfamily; 0.429
8 fp_D P11484 199 LIFDLGGGTFDVSLLH                  EEEECCCCCCEEEEEE c1a-AT-5 multi 0.01 0.017 0.119 boundary MID|HSP70 superfamily; 0.143
9 fp_beta_D P11484 203 LGGGTFDVSLLHIAG                 CCCCCCEEEEEEEEC c1b-AT-4 multi 0.01 0.018 0.093 boundary MID|HSP70 superfamily; 0.714
10 fp_beta_D P11484 204 GGGTFDVSLLHIAG                CCCCCEEEEEEEEC c2-4 multi-selected 0.01 0.018 0.091 boundary MID|HSP70 superfamily; 0.714
11 fp_beta_D P11484 208 FDVSLLHIAGGVYTVK                  CEEEEEEEECCEEEEE c1aR-5 multi-selected 0.01 0.024 0.15 boundary MID|HSP70 superfamily; 0.714
12 fp_beta_D P11484 211 SLLHIAGGVYTVKS                EEEEEECCEEEEEC c3-4 multi-selected 0.01 0.028 0.19 boundary MID|HSP70 superfamily; 0.714
13 fp_D P11484 273 AKRTLSSVTQTTVEVDS                   HHHCCCCCCEEEEEEEC c1c-AT-4 multi-selected 0.072 0.141 0.377 boundary MID|HSP70 superfamily; 0.375
14 fp_beta_D P11484 276 TLSSVTQTTVEVDS                CCCCCCEEEEEEEC c3-AT multi 0.063 0.138 0.367 boundary MID|HSP70 superfamily; 0.571
15 fp_beta_D P11484 279 SVTQTTVEVDSLFD                CCCEEEEEEECCCC c3-AT multi 0.042 0.105 0.341 boundary MID|HSP70 superfamily; 1.0
16 fp_O P11484 312 LFKSTLEPVEQVLK                HHHHHHHHHHHHHH c3-AT uniq 0.03 0.026 0.259 ORD MID|HSP70 superfamily; 0.0
17 fp_O P11484 345 RIPKVQKLLSDFFD                CCHHHHHHHHHHCC c3-4 uniq 0.039 0.044 0.223 ORD MID|HSP70 superfamily; 0.0
18 fp_beta_D P11484 388 TSDETKDLLLLDVAP                 CCCCCCCEEEEECCC c1b-AT-4 uniq 0.023 0.096 0.262 boundary MID|HSP70 superfamily; 0.571
19 fp_D P11484 396 LLLDVAPLSLGVGMQG                  EEEECCCCCCCCCCCC c1d-5 uniq 0.011 0.068 0.172 boundary MID|HSP70 superfamily; 0.0
20 fp_D P11484 405 LGVGMQGDMFGIVVPR                  CCCCCCCCCEEECCCC c1a-4 multi-selected 0.011 0.098 0.24 boundary MID|HSP70 superfamily; 0.286
21 fp_D P11484 405 LGVGMQGDMFGIVVPRN                   CCCCCCCCCEEECCCCC c1cR-4 multi 0.011 0.098 0.249 boundary MID|HSP70 superfamily; 0.375
22 fp_D P11484 454 CKENTLLGEFDLKN                CCCCCCCCCCCCCC c2-AT-4 uniq 0.038 0.061 0.354 __ MID|HSP70 superfamily; 0.0
23 fp_D P11484 478 LEAIFEVDANGILKVTA                   EEEEEEECCCCCEEEEE c1c-AT-4 uniq 0.064 0.032 0.26 boundary MID|HSP70 superfamily; 0.375
24 fp_D P11484 518 EIEKMVNQAEEFKA                HHHHHHHHHHHHHH c3-AT uniq 0.263 0.074 0.435 boundary MID|HSP70 superfamily; 0.0
25 cand_D P11484 574 IEAALSDALAALQIED ++++++++++++++   HHHHHHHHHHHHHHCC c1a-4 multi-selected 0.104 0.115 0.347 boundary boundary|HSP70 superfamily; 0.0
26 cand_D P11484 574 IEAALSDALAALQIED ++++++++++++++   HHHHHHHHHHHHHHCC c1d-AT-4 multi 0.104 0.115 0.347 boundary boundary|HSP70 superfamily; 0.0
27 fp_D P11484 594 ELRKAEVGLKRVVT                HHHHHHHHHHHHHH c3-AT uniq 0.328 0.178 0.417 boundary boundary|HSP70 superfamily; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment