P14373 | Zinc finger protein RFP   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D P14373 16 CPVCLQYFAEPMMLDC                  CCCCCCCCCCCCCCCC c1aR-4 uniq 0.096 0.139 0.021 boundary small|RING-HC_TRIM11_like_C-IV; 0.0
2 fp_D P14373 70 HLANVTQLVKQLRT                HHHHHHHHHHCCCC c3-4 uniq 0.214 0.174 0.528 boundary 0.0
3 fp_D P14373 128 SVLPLEEAVEGFKE     .......... CCCCHHHHHHHHHH c3-4 uniq 0.072 0.045 0.392 boundary boundary|SMC_N superfamily; 0.0
4 cand_D P14373 196 HEYRLLARLEELDLAI ........*++*+*.. HHHHHHHHHHHHHHHH c1a-4 multi-selected 0.146 0.086 0.122 boundary MID|SMC_N superfamily; 0.0
5 cand_D P14373 197 EYRLLARLEELDLAI .......*++*+*.. HHHHHHHHHHHHHHH c1b-4 multi 0.151 0.088 0.12 boundary MID|SMC_N superfamily; 0.0
6 cand_D P14373 198 YRLLARLEELDLAI ......*++*+*.. HHHHHHHHHHHHHH c2-AT-4 multi 0.156 0.089 0.117 boundary MID|SMC_N superfamily; 0.0
7 fp_D P14373 218 AITQFSCNISHLSS .............. HHHHHHHHHHHHHH c3-4 uniq 0.052 0.078 0.154 boundary MID|SMC_N superfamily; 0.0
8 fp_D P14373 225 NISHLSSLIAQLEE .............. HHHHHHHHHHHHHH c3-4 uniq 0.049 0.058 0.263 boundary MID|SMC_N superfamily; 0.0
9 fp_D P14373 251 IGDTLSRAERIRIPE .....           HHHHHHHCCCCCCCC c1b-AT-4 uniq 0.208 0.13 0.337 DISO MID|SMC_N superfamily; 0.0
10 fp_D P14373 265 EPWITPPDLQEKIHIFA                   CCCCCCHHHHHHHHCCC c1c-AT-4 uniq 0.184 0.079 0.205 DISO MID|SMC_N superfamily; 0.0
11 fp_D P14373 273 LQEKIHIFAQKCLFLTE                   HHHHHHCCCHHHHHHHH c1c-AT-4 uniq 0.134 0.074 0.089 DISO MID|SMC_N superfamily; 0.0
12 fp_D P14373 307 ELREAQLYSVDVTL                HHHHCCCCEEEEEC c2-AT-5 uniq 0.075 0.073 0.263 boundary boundary|SMC_N superfamily; boundary|SPRY_PRY_TRIM27; 0.286
13 fp_D P14373 425 TALPLRTPLQRVGIFL                  CCCCCCCCCCEEEEEE c1a-4 multi-selected 0.099 0.039 0.125 boundary MID|SPRY_PRY_TRIM27; 0.143
14 fp_D P14373 427 LPLRTPLQRVGIFL                CCCCCCCCEEEEEE c2-AT-4 multi 0.085 0.034 0.117 boundary MID|SPRY_PRY_TRIM27; 0.286
15 fp_D P14373 436 VGIFLDYDAGEVSFYN                  EEEEEECCCCEEEEEE c1a-AT-4 uniq 0.011 0.01 0.068 boundary MID|SPRY_PRY_TRIM27; 0.429

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment