P15682 | Nucleoprotein   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D P15682 28 SVGKMIGGIGRFYIQM                  HHHHHHHHHHHHHHHH c1a-5 multi-selected 0.044 0.071 0.206 boundary MID|Flu_NP superfamily; 0.0
2 fp_D P15682 29 VGKMIGGIGRFYIQM                 HHHHHHHHHHHHHHH c1b-4 multi 0.035 0.069 0.188 boundary MID|Flu_NP superfamily; 0.0
3 fp_D P15682 35 GIGRFYIQMCTELKLSD                   HHHHHHHHHHHHHCCCC c1c-5 uniq 0.024 0.075 0.163 boundary MID|Flu_NP superfamily; 0.0
4 fp_D P15682 57 IQNSLTIERMVLSA                HHHHHHHHHHHHHH c2-4 uniq 0.034 0.067 0.273 boundary MID|Flu_NP superfamily; 0.0
5 fp_D P15682 125 NGDDATAGLTHMMIWH                  CCCCCCCCCCEEEEEC c1a-AT-4 multi-selected 0.043 0.108 0.336 boundary MID|Flu_NP superfamily; 0.143
6 fp_D P15682 126 GDDATAGLTHMMIWH                 CCCCCCCCCEEEEEC c1b-AT-4 multi 0.042 0.104 0.331 boundary MID|Flu_NP superfamily; 0.286
7 fp_D P15682 127 DDATAGLTHMMIWH                CCCCCCCCEEEEEC c2-AT-4 multi 0.041 0.098 0.328 boundary MID|Flu_NP superfamily; 0.286
8 fp_D P15682 178 AAGAAVKGVGTMVMEL                  CCCCCCCCCHHHHHHH c1a-AT-4 multi 0.07 0.286 0.286 DISO MID|Flu_NP superfamily; 0.0
9 fp_D P15682 179 AGAAVKGVGTMVMEL                 CCCCCCCCHHHHHHH c1b-4 multi 0.064 0.269 0.269 DISO MID|Flu_NP superfamily; 0.0
10 fp_D P15682 182 AVKGVGTMVMELIRMIK                   CCCCCHHHHHHHHHHHH c1c-5 multi-selected 0.036 0.171 0.214 DISO MID|Flu_NP superfamily; 0.0
11 fp_D P15682 182 AVKGVGTMVMELIR                CCCCCHHHHHHHHH c2-AT-5 multi 0.04 0.186 0.231 DISO MID|Flu_NP superfamily; 0.0
12 fp_D P15682 182 AVKGVGTMVMELIR                CCCCCHHHHHHHHH c3-4 multi-selected 0.04 0.186 0.231 DISO MID|Flu_NP superfamily; 0.0
13 fp_D P15682 184 KGVGTMVMELIRMIK                 CCCHHHHHHHHHHHH c1b-AT-4 multi 0.027 0.137 0.192 DISO MID|Flu_NP superfamily; 0.0
14 fp_D P15682 185 GVGTMVMELIRMIK                CCHHHHHHHHHHHH c2-5 multi-selected 0.024 0.124 0.186 DISO MID|Flu_NP superfamily; 0.0
15 fp_D P15682 185 GVGTMVMELIRMIK                CCHHHHHHHHHHHH c3-4 multi-selected 0.024 0.124 0.186 DISO MID|Flu_NP superfamily; 0.0
16 fp_D P15682 189 MVMELIRMIKRGINDRN                   HHHHHHHHHHHCCCCCC c1cR-4 multi 0.028 0.128 0.207 boundary MID|Flu_NP superfamily; 0.0
17 fp_D P15682 247 NPGNAEFEDLIFLA  ............. CCCCCHHHHHHHHH c2-AT-4 multi 0.046 0.126 0.203 boundary MID|Flu_NP superfamily; 0.0
18 fp_D P15682 252 EFEDLIFLARSALILRG ................. HHHHHHHHHHHHHHCCC c1c-AT-5 multi-selected 0.025 0.082 0.102 boundary MID|Flu_NP superfamily; 0.0
19 fp_D P15682 253 FEDLIFLARSALILRG ................ HHHHHHHHHHHHHCCC c1d-AT-4 multi 0.024 0.079 0.092 boundary MID|Flu_NP superfamily; 0.0
20 fp_D P15682 255 DLIFLARSALILRG .............. HHHHHHHHHHHCCC c3-AT multi 0.024 0.078 0.067 boundary MID|Flu_NP superfamily; 0.0
21 fp_D P15682 332 ACHSAAFEDLRVSS                HHHCCCCCCCCCEE c2-AT-4 uniq 0.011 0.042 0.143 boundary MID|Flu_NP superfamily; 0.0
22 fp_D P15682 342 RVSSFIRGTKVVPR                CCEEEECCCCCCCC c3-AT uniq 0.071 0.075 0.272 boundary MID|Flu_NP superfamily; 0.429
23 fp_D P15682 354 PRGKLSTRGVQIAS                CCCCCCCCCEEECC c2-AT-4 uniq 0.289 0.184 0.472 boundary MID|Flu_NP superfamily; 0.143
24 fp_D P15682 370 NMETMESSTLELRS                CCCCCCCCCCEEEE c3-AT uniq 0.155 0.223 0.44 DISO MID|Flu_NP superfamily; 0.0
25 fp_D P15682 436 RTSDMRTEIIRLME                CCCCHHHHHHHHHH c2-AT-4 uniq 0.196 0.155 0.586 DISO MID|Flu_NP superfamily; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment