P16727 | 65 kDa early nonstructural protein   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D P16727 98 RQPRVHRGTYHLIQLHL                   CCCCCCCCCEEEEEEEC c1c-AT-4 multi-selected 0.029 0.069 0.552 boundary MID|Cytomega_UL84 superfamily; 0.375
2 fp_beta_D P16727 102 VHRGTYHLIQLHLDL                 CCCCCEEEEEEECCC c1b-AT-4 multi 0.019 0.046 0.529 boundary MID|Cytomega_UL84 superfamily; 0.857
3 fp_beta_D P16727 102 VHRGTYHLIQLHLDLRP                   CCCCCEEEEEEECCCCC c1c-AT-4 multi-selected 0.018 0.048 0.515 boundary MID|Cytomega_UL84 superfamily; 0.875
4 fp_D P16727 212 LRSVIDQQLTRMAIVR                  EHHHHHHHHHHHCEEE c1a-4 multi-selected 0.03 0.042 0.2 boundary MID|Cytomega_UL84 superfamily; 0.0
5 cand_D P16727 216 IDQQLTRMAIVRLSL             *+* HHHHHHHHCEEEEEE c1b-4 multi 0.027 0.04 0.146 boundary MID|Cytomega_UL84 superfamily; 0.286
6 cand_D P16727 216 IDQQLTRMAIVRLSLNL             *+*++ HHHHHHHHCEEEEEEEE c1c-AT-4 multi 0.025 0.039 0.138 boundary MID|Cytomega_UL84 superfamily; 0.375
7 cand_D P16727 217 DQQLTRMAIVRLSL            *+* HHHHHHHCEEEEEE c2-AT-4 multi 0.026 0.04 0.139 boundary MID|Cytomega_UL84 superfamily; 0.286
8 cand_D P16727 217 DQQLTRMAIVRLSLNL            *+*++ HHHHHHHCEEEEEEEE c1a-AT-4 multi 0.024 0.039 0.131 boundary MID|Cytomega_UL84 superfamily; 0.429
9 cand_beta_D P16727 219 QLTRMAIVRLSLNLFA          *+*++++ HHHHHCEEEEEEEEEE c1d-5 multi 0.021 0.037 0.114 boundary MID|Cytomega_UL84 superfamily; 0.714
10 cand_beta_D P16727 219 QLTRMAIVRLSLNL          *+*++ HHHHHCEEEEEEEE c2-5 multi 0.022 0.038 0.122 boundary MID|Cytomega_UL84 superfamily; 0.571
11 cand_beta_D P16727 221 TRMAIVRLSLNLFALR        *+*++++++ HHHCEEEEEEEEEEEE c1aR-5 multi 0.017 0.036 0.104 boundary MID|Cytomega_UL84 superfamily; 1.0
12 cand_beta_D P16727 222 RMAIVRLSLNLFALRI       *+*+++++++ HHCEEEEEEEEEEEEC c1a-5 multi-selected 0.016 0.037 0.099 boundary MID|Cytomega_UL84 superfamily; 1.0
13 cand_beta_D P16727 224 AIVRLSLNLFALRIIT     *+*+++++++   CEEEEEEEEEEEECCC c1a-5 multi-selected 0.016 0.04 0.092 boundary MID|Cytomega_UL84 superfamily; 1.0
14 cand_beta_D P16727 224 AIVRLSLNLFALRI     *+*+++++++ CEEEEEEEEEEEEC c2-5 multi 0.015 0.036 0.09 boundary MID|Cytomega_UL84 superfamily; 1.0
15 cand_beta_D P16727 226 VRLSLNLFALRIIT   *+*+++++++   EEEEEEEEEEECCC c2-4 multi 0.014 0.039 0.088 boundary MID|Cytomega_UL84 superfamily; 1.0
16 cand_beta_D P16727 226 VRLSLNLFALRIITPL   *+*+++++++     EEEEEEEEEEECCCCC c1aR-4 multi 0.016 0.048 0.094 boundary MID|Cytomega_UL84 superfamily; 1.0
17 cand_D P16727 231 NLFALRIITPLLKRLP +++++++          EEEEEECCCCCCCCCC c1aR-5 multi 0.034 0.084 0.141 boundary MID|Cytomega_UL84 superfamily; 0.286
18 fp_D P16727 275 DINNVTENAASVAD                CCCCCCCCCCCCCC c3-AT uniq 0.537 0.683 0.456 boundary MID|Cytomega_UL84 superfamily; 0.0
19 fp_beta_D P16727 293 TDADLTPTLTVRVRH                 CCCCCCCEEEEEEEE c1b-AT-4 uniq 0.141 0.28 0.326 boundary MID|Cytomega_UL84 superfamily; 0.571
20 fp_D P16727 336 TAKTLGPSVFGRLELDP                   HHHHCCCCCCCCCCCCC c1c-4 uniq 0.128 0.086 0.467 boundary MID|Cytomega_UL84 superfamily; 0.0
21 cand_beta_D P16727 355 SPPDLTLSSLTLYQ     *+++++++   CCCCCEEEEEEEEE c2-4 uniq 0.035 0.035 0.361 __ MID|Cytomega_UL84 superfamily; 0.714
22 fp_beta_D P16727 381 TEAPADPVAFRLRLRR                  CCCCCCCEEEEEEECC c1d-AT-4 uniq 0.049 0.074 0.307 boundary MID|Cytomega_UL84 superfamily; 0.571
23 fp_D P16727 489 FPRDALLGRLYFIS                ECCCCCCEEEEEEE c2-AT-4 uniq 0.018 0.043 0.156 boundary MID|Cytomega_UL84 superfamily; 0.429
24 fp_beta_D P16727 533 SQQQLSVLGASIALED                  CCCEEEEECCCCCCCC c1d-4 multi-selected 0.056 0.279 0.316 DISO MID|Cytomega_UL84 superfamily; 0.571
25 fp_D P16727 538 SVLGASIALEDLLP                EEECCCCCCCCCCC c3-AT multi-selected 0.051 0.257 0.278 DISO MID|Cytomega_UL84 superfamily; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment