P16800 | Capsid-binding protein UL94   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_beta_D P16800 94 RICHLPTLYQLSFGG                 EECCCCCEEEEEECC c1b-5 multi 0.014 0.03 0.053 boundary MID|PHA03352; 0.571
2 fp_beta_D P16800 97 HLPTLYQLSFGG              CCCCEEEEEECC c2-rev multi-selected 0.013 0.026 0.05 boundary MID|PHA03352; 0.833
3 fp_D P16800 117 FLPSFSQVTSSMTC                CCCCCCCCCCCCCC c3-AT uniq 0.285 0.19 0.103 boundary MID|PHA03352; 0.0
4 fp_D P16800 129 TCDGITPDVIYEVCMLV                   CCCCCCCCHHCCCCCCC c1c-4 multi-selected 0.123 0.083 0.056 boundary MID|PHA03352; 0.0
5 fp_D P16800 130 CDGITPDVIYEVCMLV                  CCCCCCCHHCCCCCCC c1a-AT-4 multi 0.114 0.076 0.053 boundary MID|PHA03352; 0.0
6 fp_D P16800 130 CDGITPDVIYEVCMLV                  CCCCCCCHHCCCCCCC c1d-AT-4 multi 0.114 0.076 0.053 boundary MID|PHA03352; 0.0
7 fp_beta_O P16800 185 YTLFFYILCYDLFTSC                  CEEEEEEEECCCCCCC c1aR-4 uniq 0.01 0.01 0.007 ORD MID|PHA03352; 0.714
8 fp_D P16800 281 YLCAVGSKTAAQVTLGD                   EEEEECCCCCCCCCCCC c1c-AT-5 uniq 0.179 0.071 0.108 boundary MID|PHA03352; 0.125
9 fp_D P16800 291 AQVTLGDGLDYHIGVKD                   CCCCCCCCCCEEEEEEC c1c-4 uniq 0.116 0.053 0.221 boundary MID|PHA03352; 0.25
10 fp_O P16800 321 DLVKVEEPVSRMIVCS                  EEEECCCHHHHHHHHC c1a-5 uniq 0.01 0.033 0.12 ORD boundary|PHA03352; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment