P21952 | POU domain, class 3, transcription factor 1   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D P21952 263 RRIKLGFTQADVGLAL                  HHCCCCCCHHHHHHHH c1d-AT-4 multi-selected 0.014 0.133 0.278 boundary boundary|POU; 0.0
2 fp_D P21952 265 IKLGFTQADVGLALGT                  CCCCCCHHHHHHHHHH c1d-AT-4 multi-selected 0.013 0.126 0.265 boundary boundary|POU; 0.0
3 fp_D P21952 274 VGLALGTLYGNVFSQT                  HHHHHHHHCCCCCCCC c1aR-4 uniq 0.011 0.117 0.175 boundary MID|POU; 0.0
4 fp_D P21952 286 FSQTTICRFEALQLSF                  CCCCCHHHHHCCCCCH c1a-AT-4 multi-selected 0.012 0.104 0.13 boundary boundary|POU; 0.0
5 fp_D P21952 287 SQTTICRFEALQLSF                 CCCCHHHHHCCCCCH c1b-4 multi 0.012 0.102 0.131 boundary boundary|POU; 0.0
6 fp_D P21952 290 TICRFEALQLSFKN                CHHHHHCCCCCHHH c2-AT-5 multi 0.012 0.098 0.135 boundary boundary|POU; 0.0
7 fp_D P21952 293 RFEALQLSFKNMCK                HHHCCCCCHHHHHH c3-4 multi-selected 0.011 0.095 0.142 boundary boundary|POU; 0.0
8 cand_D P21952 363 SAHEITGLADSLQLEK     ++++++++++   CHHHHHHHHHHCCCCC c1a-AT-4 multi-selected 0.389 0.075 0.396 DISO boundary|Homeobox; 0.0
9 cand_D P21952 363 SAHEITGLADSLQLEK     ++++++++++   CHHHHHHHHHHCCCCC c1d-4 multi 0.389 0.075 0.396 DISO boundary|Homeobox; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment