P24346 | Putative ATP-dependent RNA helicase an3   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 cand_D P24346 8 NVLNLDQQFAGLDLNS            * *   CCCCHHHHCCCCCCCC c1a-5 uniq 0.903 0.939 0.475 DISO boundary|Rho superfamily; 0.0
2 fp_D P24346 216 CPPHIESFHDVTMGE                 CCCCCCCCCCCCCCH c1b-4 multi 0.011 0.074 0.476 boundary boundary|SrmB; 0.0
3 fp_O P24346 219 HIESFHDVTMGEIIMGN                   CCCCCCCCCCCHHHHHH c1c-AT-5 multi 0.01 0.065 0.423 ORD MID|SrmB; 0.0
4 fp_O P24346 222 SFHDVTMGEIIMGN                CCCCCCCCHHHHHH c2-5 multi-selected 0.01 0.064 0.391 ORD MID|SrmB; 0.0
5 fp_O P24346 224 HDVTMGEIIMGNIQLTR                   CCCCCCHHHHHHHHCCC c1cR-4 multi 0.01 0.057 0.4 ORD MID|SrmB; 0.0
6 fp_O P24346 224 HDVTMGEIIMGNIQLTR                   CCCCCCHHHHHHHHCCC c1c-4 multi-selected 0.01 0.057 0.4 ORD MID|SrmB; 0.0
7 fp_O P24346 227 TMGEIIMGNIQLTR                CCCHHHHHHHHCCC c2-5 multi-selected 0.01 0.052 0.393 ORD MID|SrmB; 0.0
8 fp_D P24346 308 PLSLVLAPTRELAVQI                  CCEEEECCCHHHHHHH c1a-AT-5 multi-selected 0.018 0.018 0.157 boundary MID|SrmB; 0.286
9 fp_D P24346 309 LSLVLAPTRELAVQI                 CEEEECCCHHHHHHH c1b-AT-4 multi 0.017 0.018 0.145 boundary MID|SrmB; 0.143
10 fp_O P24346 360 LLVATPGRLVDMME                EEECCCCHHHHHHH c3-AT uniq 0.005 0.012 0.167 ORD MID|SrmB; 0.0
11 fp_O P24346 373 ERGKIGLDFCKYLVLDE                 * HCCCCCCCCEEEEEEEC c1c-4 uniq 0.009 0.024 0.068 ORD MID|SrmB; 0.375
12 fp_O P24346 382 CKYLVLDEADRMLDMGF        *          EEEEEEECCCCCCCCCC c1c-AT-4 multi-selected 0.052 0.049 0.1 ORD MID|SrmB; 0.375
13 fp_O P24346 383 KYLVLDEADRMLDMGF       *          EEEEEECCCCCCCCCC c1d-AT-4 multi 0.055 0.051 0.101 ORD MID|SrmB; 0.286
14 fp_O P24346 386 VLDEADRMLDMGFEP    *            EEECCCCCCCCCCHH c1b-AT-5 multi 0.065 0.059 0.134 ORD MID|SrmB; 0.0
15 fp_O P24346 418 QTMMFSATFPKEIQILA                   EEEEEECCCHHHHHHHH c1cR-5 uniq 0.012 0.018 0.184 ORD MID|SrmB; 0.25
16 fp_O P24346 430 IQILARDFLDEYIFLAV                   HHHHHHHHHHCCEEEEE c1c-AT-4 uniq 0.012 0.011 0.047 ORD MID|SrmB; 0.0
17 fp_D P24346 537 VATAVAARGLDISN                EEECCCCCCCCCCC c2-AT-4 uniq 0.01 0.03 0.166 boundary MID|SrmB; 0.0
18 fp_O P24346 544 RGLDISNVKHVINFDL                  CCCCCCCCCEEEEECC c1aR-4 multi-selected 0.007 0.023 0.176 ORD MID|SrmB; 0.286
19 fp_O P24346 544 RGLDISNVKHVINFDL                  CCCCCCCCCEEEEECC c1d-4 multi 0.007 0.023 0.176 ORD MID|SrmB; 0.286
20 fp_beta_O P24346 547 DISNVKHVINFDLPS                 CCCCCCEEEEECCCC c1b-5 multi 0.007 0.019 0.188 ORD MID|SrmB; 0.714
21 fp_O P24346 569 RIGRTGRVGNLGLAT                 CCCCCCCCCCCCEEE c1b-AT-5 uniq 0.01 0.05 0.311 ORD MID|SrmB; 0.0
22 fp_beta_O P24346 575 RVGNLGLATSFFNE                CCCCCCEEEECCCC c3-AT uniq 0.01 0.038 0.27 ORD MID|SrmB; 0.571
23 fp_D P24346 587 NEKNINITKDLLDLLV                  CCCCCCHHHHHHHHHH c1d-AT-4 multi 0.015 0.037 0.215 boundary boundary|SrmB; 0.0
24 fp_D P24346 589 KNINITKDLLDLLVEA                  CCCCHHHHHHHHHHHC c1a-4 multi-selected 0.018 0.038 0.219 boundary boundary|SrmB; 0.0
25 fp_D P24346 590 NINITKDLLDLLVEA                 CCCHHHHHHHHHHHC c1b-AT-5 multi 0.017 0.038 0.222 boundary boundary|SrmB; 0.0
26 fp_D P24346 590 NINITKDLLDLLVE                CCCHHHHHHHHHHH c3-AT multi 0.016 0.037 0.217 boundary boundary|SrmB; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment