P25054 | Adenomatous polyposis coli protein   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D P25054 5 SYDQLLKQVEALKMEN                  HHHHHHHHHHHHHHCC c1a-4 multi-selected 0.864 0.518 0.408 DISO boundary|APC_N_CC; boundary|SMC_N superfamily; 0.0
2 fp_D P25054 6 YDQLLKQVEALKMEN                 HHHHHHHHHHHHHCC c1b-4 multi 0.863 0.509 0.413 DISO boundary|APC_N_CC; boundary|SMC_N superfamily; 0.0
3 fp_D P25054 33 HLTKLETEASNMKE                CCCCHHHCCCCHHH c3-AT uniq 0.915 0.617 0.609 DISO boundary|APC_N_CC; MID|SMC_N superfamily; 0.0
4 cand_D P25054 64 GQIDLLERLKELNLDS     +++++++*+*   CCHHHHHHHHCCCCCC c1a-4 multi-selected 0.561 0.476 0.383 DISO boundary|APC_N_CC; MID|SMC_N superfamily; 0.0
5 cand_D P25054 65 QIDLLERLKELNLDS    +++++++*+*   CHHHHHHHHCCCCCC c1b-5 multi 0.539 0.466 0.379 DISO boundary|APC_N_CC; MID|SMC_N superfamily; 0.0
6 fp_D P25054 168 RIDSLPLTENFSLQT ++++*+*         HCCCCCCCCCCCCHH c1b-AT-5 uniq 0.881 0.42 0.469 DISO MID|SMC_N superfamily; MID|Suppressor_APC; 0.0
7 fp_D P25054 185 TRRQLEYEARQIRVAM                  HHHHHHHHHHHHHHHH c1a-AT-4 uniq 0.627 0.525 0.504 DISO MID|SMC_N superfamily; boundary|Suppressor_APC; 0.0
8 fp_D P25054 220 RIQQIEKDILRIRQ                HHHHHHHHHHHHHH c3-4 uniq 0.403 0.542 0.364 DISO MID|SMC_N superfamily; boundary|Suppressor_APC; 0.0
9 fp_D P25054 300 APRRLTSHLGTKVEMVY                   CCCCCCCCCCCEEEEEE c1c-4 multi-selected 0.848 0.278 0.519 DISO boundary|SMC_N superfamily; 0.125
10 fp_D P25054 301 PRRLTSHLGTKVEMVY                  CCCCCCCCCCEEEEEE c1d-AT-4 multi 0.842 0.259 0.509 DISO boundary|SMC_N superfamily; 0.143
11 fp_beta_D P25054 308 LGTKVEMVYSLLSMLG                  CCCEEEEEEECHHHCC c1d-4 multi 0.798 0.126 0.399 DISO boundary|SMC_N superfamily; boundary|ARM; 0.857
12 fp_beta_D P25054 310 TKVEMVYSLLSMLGTHD                   CEEEEEEECHHHCCCCC c1cR-4 multi 0.775 0.116 0.39 DISO boundary|ARM; 0.5
13 fp_beta_D P25054 311 KVEMVYSLLSMLGT                EEEEEEECHHHCCC c3-4 multi-selected 0.794 0.107 0.39 DISO boundary|ARM; 0.571
14 fp_D P25054 442 VEHQICPAVCVLMKL                 CCCCCHHHHHHHCCC c1b-AT-4 multi 0.513 0.174 0.162 DISO 0.0
15 fp_D P25054 442 VEHQICPAVCVLMKLSF                   CCCCCHHHHHHHCCCCC c1c-4 multi-selected 0.533 0.167 0.166 DISO 0.0
16 fp_D P25054 445 QICPAVCVLMKLSFDE                  CCHHHHHHHCCCCCCH c1a-AT-5 multi 0.538 0.145 0.139 DISO 0.0
17 fp_D P25054 445 QICPAVCVLMKLSFDE                  CCHHHHHHHCCCCCCH c1d-AT-5 multi 0.538 0.145 0.139 DISO 0.0
18 fp_D P25054 446 ICPAVCVLMKLSFDE                 CHHHHHHHCCCCCCH c1b-4 multi 0.542 0.142 0.132 DISO 0.0
19 fp_D P25054 468 ELGGLQAIAELLQVDC                  HHCCHHHHHHHHHHHH c1a-AT-5 multi-selected 0.471 0.063 0.186 DISO 0.0
20 fp_D P25054 468 ELGGLQAIAELLQVDC                  HHCCHHHHHHHHHHHH c1d-5 multi 0.471 0.063 0.186 DISO 0.0
21 fp_D P25054 477 ELLQVDCEMYGLTN                HHHHHHHHHHCCCC c3-4 uniq 0.311 0.065 0.11 boundary 0.0
22 fp_D P25054 497 LRRYAGMALTNLTFGD                  HHHHHHHHHCCCCCCC c1a-AT-4 multi 0.109 0.025 0.133 boundary 0.0
23 fp_D P25054 499 RYAGMALTNLTFGD                HHHHHHHCCCCCCC c2-4 multi-selected 0.094 0.025 0.129 boundary 0.0
24 fp_D P25054 502 GMALTNLTFGDVAN                HHHHCCCCCCCCCC c3-AT multi 0.111 0.033 0.125 boundary 0.0
25 fp_D P25054 518 TLCSMKGCMRALVA                CCCCCCCHHHHHHH c3-4 uniq 0.53 0.035 0.113 boundary small|ARM; 0.0
26 fp_D P25054 565 EVGSVKALMECALEVKK                   HCCCHHHHHHHHHHCCC c1c-5 multi-selected 0.586 0.046 0.163 DISO 0.0
27 fp_D P25054 568 SVKALMECALEVKK                CHHHHHHHHHHCCC c3-AT multi 0.574 0.044 0.156 DISO 0.0
28 fp_D P25054 602 NKADICAVDGALAFLV                  CCCCCCCCCCHHHHHH c1d-4 multi 0.558 0.115 0.063 DISO 0.0
29 fp_D P25054 605 DICAVDGALAFLVG                CCCCCCCHHHHHHH c3-4 multi-selected 0.497 0.114 0.058 DISO 0.0
30 fp_D P25054 605 DICAVDGALAFLVGT                 CCCCCCCHHHHHHHH c1b-AT-5 multi 0.491 0.113 0.06 DISO 0.0
31 fp_D P25054 693 KDQEALWDMGAVSMLK                  HHHHHHHHCCCHHHHH c1a-AT-4 multi-selected 0.497 0.29 0.295 DISO small|Arm; 0.0
32 fp_D P25054 694 DQEALWDMGAVSMLK                 HHHHHHHCCCHHHHH c1b-4 multi 0.478 0.278 0.293 DISO small|Arm; 0.0
33 fp_D P25054 768 HLSETFDNIDNLSP                HHHHHCCCCCCCCC c3-AT uniq 0.919 0.814 0.569 DISO MID|Arm_APC_u3; 0.0
34 fp_D P25054 810 RSDNFNTGNMTVLS                CCCCCCCCCCCCCC c2-AT-4 uniq 0.942 0.97 0.648 DISO MID|Arm_APC_u3; 0.0
35 fp_D P25054 879 QISTTAAQIAKVME                CCCHHHHHHHHHHH c3-AT uniq 0.953 0.96 0.578 DISO MID|Arm_APC_u3; 0.0
36 fp_D P25054 886 QIAKVMEEVSAIHT                HHHHHHHHCCCCCC c3-4 uniq 0.967 0.949 0.612 DISO MID|Arm_APC_u3; 0.0
37 fp_D P25054 1300 NTLQIAEIKEKIGTRS                  CCCCCCCCCCCCCCCC c1aR-4 uniq 0.99 0.986 0.66 DISO boundary|APC_u9; boundary|DUF4045 superfamily; 0.0
38 fp_D P25054 1468 KQAAVNAAVQRVQVLP                  CCCCCCCCCCCCCCCC c1a-4 multi-selected 0.974 0.978 0.661 DISO MID|DUF4045 superfamily; 0.0
39 fp_D P25054 1468 KQAAVNAAVQRVQVLP                  CCCCCCCCCCCCCCCC c1d-AT-4 multi 0.974 0.978 0.661 DISO MID|DUF4045 superfamily; 0.0
40 fp_D P25054 1470 AAVNAAVQRVQVLP                CCCCCCCCCCCCCC c2-AT-4 multi 0.973 0.977 0.639 DISO MID|DUF4045 superfamily; 0.0
41 fp_D P25054 1471 AVNAAVQRVQVLPD                CCCCCCCCCCCCCC c3-AT multi 0.972 0.976 0.622 DISO MID|DUF4045 superfamily; 0.0
42 fp_D P25054 1477 QRVQVLPDADTLLHFAT                   CCCCCCCCCCCCCCCCC c1c-AT-4 multi-selected 0.974 0.972 0.6 DISO MID|DUF4045 superfamily; 0.0
43 fp_D P25054 1478 RVQVLPDADTLLHFAT                  CCCCCCCCCCCCCCCC c1d-AT-5 multi 0.974 0.971 0.593 DISO MID|DUF4045 superfamily; 0.0
44 cand_D P25054 1649 INFSTATSLSDLTIES         *  *     CCCCCCCCCCCCCCCC c1a-AT-4 multi-selected 0.99 0.96 0.569 DISO MID|DUF4045 superfamily; boundary|APC_u13; 0.0
45 cand_D P25054 1650 NFSTATSLSDLTIES        *  *     CCCCCCCCCCCCCCC c1b-AT-5 multi 0.99 0.961 0.575 DISO MID|DUF4045 superfamily; boundary|APC_u13; 0.0
46 cand_D P25054 1651 FSTATSLSDLTIES       *  *     CCCCCCCCCCCCCC c2-AT-4 multi 0.99 0.961 0.589 DISO MID|DUF4045 superfamily; boundary|APC_u13; 0.0
47 fp_D P25054 1739 KPFRVKKIMDQVQQAS                  CCCCCCCCHHHHCCCC c1aR-4 uniq 0.98 0.972 0.722 DISO boundary|APC_u13; boundary|APC_u14; 0.0
48 fp_D P25054 1943 RGAATDEKLQNFAIEN                  CCCCCCCCCCCCCCCC c1a-AT-4 uniq 0.979 0.97 0.637 DISO boundary|APC_u15; 0.0
49 fp_D P25054 2064 SPRNMGGILGEDLTLDL                   CCCCCCCCCCCCCCCCC c1c-4 uniq 0.989 0.975 0.683 DISO 0.0
50 fp_D P25054 2131 DSDSILSLKSGISLGS                  CCCCCCCCCCCCCCCC c1d-4 uniq 0.978 0.968 0.458 DISO 0.0
51 fp_D P25054 2281 ELSPVARQTSQIGG                CCCCCCCCCCCCCC c3-AT uniq 0.982 0.98 0.855 DISO MID|APC_basic; 0.0
52 fp_D P25054 2707 GNGSVPMRTVGLEN                CCCCCCCCCCCCCC c2-4 uniq 0.974 0.954 0.734 DISO MID|EB1_binding; 0.0
53 fp_D P25054 2714 RTVGLENRLNSFIQVDA                   CCCCCCCCCCCCCCCCC c1c-4 uniq 0.971 0.953 0.694 DISO MID|EB1_binding; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment