*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)
# | candidates | id | start# | sequence | secondary | class | multi-pattern | diso | spotd | iup | loc_DISO | loc_CDD | beta |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | cand_D | P27987 | 130 | KLRILQRELQNVQVNQ     ++++++++++   | HHHHHHHHHCCCCCCC | c1a-5 | uniq | 0.963 | 0.846 | 0.614 | DISO | MID|Atrophin-1 superfamily; | 0.0 |
2 | fp_D | P27987 | 289 | LAPSLGLFGASLTMAT                  | CCCCCCCCCCCCCCCC | c1d-4 | uniq | 0.959 | 0.89 | 0.568 | DISO | MID|Atrophin-1 superfamily; | 0.0 |
3 | fp_D | P27987 | 298 | ASLTMATEVAARVTSTG                   | CCCCCCCCCCCCCCCCC | c1cR-4 | uniq | 0.954 | 0.909 | 0.707 | DISO | MID|Atrophin-1 superfamily; | 0.0 |
4 | fp_O | P27987 | 696 | EQRCLDRLMVDVLRPFVP                    | HHHHHHHHHHCCCCCCCC | c4-4 | multi | 0.023 | 0.021 | 0.223 | ORD | boundary|IPK; | 0.0 |
5 | fp_O | P27987 | 701 | DRLMVDVLRPFVPAYH                  | HHHHHCCCCCCCCCCC | c1aR-4 | multi-selected | 0.014 | 0.02 | 0.221 | ORD | boundary|IPK; | 0.0 |
6 | fp_D | P27987 | 744 | CKMGIRTYLEEELTKAR                   | CCCCCCCCCHHHHHHHC | c1cR-4 | uniq | 0.05 | 0.072 | 0.32 | boundary | boundary|IPK; | 0.0 |
7 | fp_D | P27987 | 799 | WRETISSTATLGFRIEG                   | CCCCCCCCCCCCEEEEE | c1c-AT-4 | multi-selected | 0.133 | 0.13 | 0.326 | __ | MID|IPK; | 0.0 |
8 | fp_D | P27987 | 799 | WRETISSTATLGFRI                 | CCCCCCCCCCCCEEE | c1b-AT-4 | multi | 0.147 | 0.142 | 0.314 | __ | MID|IPK; | 0.0 |
9 | fp_O | P27987 | 854 | YRDRLKAIRTTLEVSP                  | HHHHHHHHHHHHHCCC | c1d-4 | uniq | 0.019 | 0.016 | 0.221 | ORD | MID|IPK; | 0.0 |
10 | fp_D | P27987 | 922 | EDGYLSGLNNLVDILT                  | CCCEEECHHHHHHHHH | c1d-4 | multi | 0.046 | 0.049 | 0.29 | boundary | boundary|IPK; | 0.286 |
11 | fp_D | P27987 | 925 | YLSGLNNLVDILTE                | EEECHHHHHHHHHH | c3-4 | multi-selected | 0.061 | 0.044 | 0.27 | boundary | boundary|IPK; | 0.0 |
12 | fp_D | P27987 | 928 | GLNNLVDILTEMSQ                | CHHHHHHHHHHHHH | c3-4 | multi-selected | 0.134 | 0.06 | 0.264 | boundary | boundary|IPK; | 0.0 |
*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment