P30021 | Tegument protein UL47   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D P30021 267 VRPSAFFAQMPLDA                CCHHHHHHHCCCCC c2-AT-4 uniq 0.042 0.138 0.366 DISO 0.0
2 fp_O P30021 315 VDPEFSIGGMYVGA                CCCCCCCCCEEECC c2-4 uniq 0.028 0.04 0.297 ORD 0.143
3 fp_O P30021 341 AMKQAMALQYRLGVGG                  HHHHHHHHHHHHHHHH c1d-AT-5 uniq 0.013 0.021 0.126 ORD 0.0
4 fp_O P30021 350 YRLGVGGLCRAVDGAR                  HHHHHHHHHHHHHCCC c1aR-4 uniq 0.037 0.044 0.182 ORD 0.0
5 fp_D P30021 362 DGARMPPTEALLFLAA                  HCCCCCCHHHHHHHHH c1d-AT-4 multi-selected 0.046 0.054 0.197 boundary 0.0
6 fp_D P30021 362 DGARMPPTEALLFLA                 HCCCCCCHHHHHHHH c1b-AT-4 multi-selected 0.048 0.056 0.194 boundary 0.0
7 fp_O P30021 458 GLQSAELYLLALRH                HHHHHHHHHHHHCC c2-AT-5 multi-selected 0.022 0.026 0.075 ORD MID|Herpes_UL47 superfamily; 0.0
8 fp_O P30021 458 GLQSAELYLLALRH                HHHHHHHHHHHHCC c3-AT multi-selected 0.022 0.026 0.075 ORD MID|Herpes_UL47 superfamily; 0.0
9 cand_O P30021 481 ERYALSAYLTLFVALAE     +++++++++++   HHHHHHHHHHHHHHHHH c1c-4 uniq 0.015 0.011 0.028 ORD MID|Herpes_UL47 superfamily; 0.0
10 fp_D P30021 566 GEAYVAVRTATTLLMAE                   HHHHHHHHHHHHHHHHH c1c-AT-4 multi-selected 0.012 0.017 0.087 boundary MID|Herpes_UL47 superfamily; 0.0
11 fp_D P30021 568 AYVAVRTATTLLMAE                 HHHHHHHHHHHHHHH c1b-AT-4 multi 0.012 0.017 0.093 boundary MID|Herpes_UL47 superfamily; 0.0
12 fp_D P30021 588 ERRDVREMTAAFLGVGL                   CCCCHHHHHHHHHHHHH c1c-AT-4 multi 0.081 0.053 0.137 boundary MID|Herpes_UL47 superfamily; 0.0
13 fp_D P30021 591 DVREMTAAFLGVGLIA                  CHHHHHHHHHHHHHHH c1a-5 multi-selected 0.058 0.034 0.122 boundary MID|Herpes_UL47 superfamily; 0.0
14 fp_D P30021 591 DVREMTAAFLGVGLIA                  CHHHHHHHHHHHHHHH c1d-AT-5 multi 0.058 0.034 0.122 boundary MID|Herpes_UL47 superfamily; 0.0
15 fp_D P30021 591 DVREMTAAFLGVGL                CHHHHHHHHHHHHH c2-AT-5 multi 0.065 0.036 0.128 __ MID|Herpes_UL47 superfamily; 0.0
16 fp_D P30021 592 VREMTAAFLGVGLIA                 HHHHHHHHHHHHHHH c1b-AT-4 multi 0.051 0.028 0.116 __ MID|Herpes_UL47 superfamily; 0.0
17 fp_D P30021 593 REMTAAFLGVGLIA                HHHHHHHHHHHHHH c2-AT-4 multi 0.044 0.024 0.112 boundary MID|Herpes_UL47 superfamily; 0.0
18 fp_D P30021 594 EMTAAFLGVGLIAQ                HHHHHHHHHHHHHH c3-AT multi 0.036 0.021 0.104 boundary MID|Herpes_UL47 superfamily; 0.0
19 fp_D P30021 598 AFLGVGLIAQRLMGSL                  HHHHHHHHHHHHHHHH c1aR-4 multi-selected 0.012 0.017 0.113 boundary MID|Herpes_UL47 superfamily; 0.0
20 fp_D P30021 598 AFLGVGLIAQRLMG                HHHHHHHHHHHHHH c3-AT multi 0.012 0.016 0.097 boundary MID|Herpes_UL47 superfamily; 0.0
21 fp_D P30021 648 AALPLVRPVSLVEFWE                  HHCCCCCCCCHHHHHH c1a-4 multi-selected 0.012 0.024 0.081 boundary MID|Herpes_UL47 superfamily; 0.0
22 fp_D P30021 649 ALPLVRPVSLVEFWE                 HCCCCCCCCHHHHHH c1b-5 multi 0.013 0.025 0.082 boundary MID|Herpes_UL47 superfamily; 0.0
23 fp_D P30021 649 ALPLVRPVSLVE              HCCCCCCCCHHH c2-rev multi-selected 0.011 0.024 0.07 boundary MID|Herpes_UL47 superfamily; 0.0
24 fp_D P30021 660 EFWEARDGVMRELRLRP                   HHHHHHHHHHHHCCCCC c1c-AT-5 uniq 0.046 0.043 0.226 boundary MID|Herpes_UL47 superfamily; 0.0
25 fp_D P30021 687 RVMELYLSLDSIEA                CEEEECCCCCCCCC c3-4 multi-selected 0.171 0.094 0.156 boundary boundary|Herpes_UL47 superfamily; 0.286
26 fp_D P30021 691 LYLSLDSIEALVGREP                  ECCCCCCCCCCCCCCC c1aR-4 multi-selected 0.154 0.119 0.185 DISO boundary|Herpes_UL47 superfamily; 0.0
27 fp_D P30021 712 VLGPLVDIAEALAD                CCCCHHHHHHHHHC c3-AT uniq 0.141 0.223 0.312 DISO boundary|Herpes_UL47 superfamily; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment