P30052 | Protein scalloped   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D P30052 93 WSPDIEQSFQEALSIYP                   CCHHHHHHHHHHHHHCC c1c-4 uniq 0.052 0.109 0.39 DISO boundary|TEA; 0.0
2 fp_D P30052 126 GRNELIARYIKLRT                CHHHHHHHHHHHHH c2-AT-4 uniq 0.085 0.156 0.353 DISO boundary|TEA; 0.0
3 fp_D P30052 140 GKTRTRKQVSSHIQVLA                   CCCCCCCCCHHHHHHHH c1c-AT-4 uniq 0.483 0.364 0.426 DISO boundary|TEA; 0.0
4 fp_D P30052 156 ARRKLREIQAKIKVQF                  HHHHHHHHHHHHHHCC c1d-4 uniq 0.585 0.388 0.253 DISO boundary|TEA; 0.0
5 fp_D P30052 221 EGRAIATHKFRLLE                CCCCCCCCCCCCCC c2-AT-4 multi 0.224 0.192 0.179 __ 0.0
6 fp_D P30052 222 GRAIATHKFRLLEFTA                  CCCCCCCCCCCCCCCC c1a-AT-4 multi-selected 0.185 0.168 0.156 boundary 0.0
7 fp_D P30052 223 RAIATHKFRLLEFTA                 CCCCCCCCCCCCCCC c1b-AT-4 multi 0.175 0.163 0.146 boundary 0.0
8 fp_D P30052 228 HKFRLLEFTAFMEIQR                  CCCCCCCCCCEEEECC c1aR-4 multi-selected 0.109 0.109 0.102 boundary 0.143
9 fp_D P30052 228 HKFRLLEFTAFMEIQR                  CCCCCCCCCCEEEECC c1a-AT-4 multi 0.109 0.109 0.102 boundary 0.143
10 fp_D P30052 228 HKFRLLEFTAFMEIQR                  CCCCCCCCCCEEEECC c1d-4 multi 0.109 0.109 0.102 boundary 0.143
11 fp_D P30052 229 KFRLLEFTAFMEIQR                 CCCCCCCCCEEEECC c1b-AT-5 multi 0.099 0.103 0.104 boundary 0.286
12 fp_D P30052 257 GKPSFSDPLLETVDIRQ                   CCCCCCCCCCCCCCHHH c1c-4 uniq 0.092 0.085 0.23 boundary 0.0
13 fp_O P30052 375 YMINFIQKLKNLPE                HHHHHHHHHHCCCC c3-4 uniq 0.021 0.035 0.09 ORD 0.0
14 fp_O P30052 387 PERYMMNSVLENFTILQ                   CCHHHCCCCCCCCEEEE c1c-4 multi 0.03 0.046 0.127 ORD 0.0
15 fp_O P30052 388 ERYMMNSVLENFTILQ                  CHHHCCCCCCCCEEEE c1a-4 multi 0.029 0.044 0.129 ORD 0.0
16 fp_O P30052 388 ERYMMNSVLENFTILQ                  CHHHCCCCCCCCEEEE c1d-4 multi 0.029 0.044 0.129 ORD 0.0
17 fp_O P30052 391 MMNSVLENFTILQVMR                  HCCCCCCCCEEEEEEE c1a-5 multi-selected 0.024 0.031 0.128 ORD 0.286
18 fp_O P30052 392 MNSVLENFTILQVMR                 CCCCCCCCEEEEEEE c1b-4 multi 0.021 0.029 0.127 ORD 0.429
19 fp_beta_D P30052 409 ETQETLLCIAYVFEVAA                   CCCCEEEEEEEEEEEEC c1c-AT-4 multi-selected 0.041 0.036 0.052 boundary 1.0
20 fp_beta_D P30052 410 TQETLLCIAYVFEVAA                  CCCEEEEEEEEEEEEC c1a-AT-4 multi-selected 0.042 0.033 0.052 boundary 1.0
21 fp_beta_D P30052 410 TQETLLCIAYVFEVAA                  CCCEEEEEEEEEEEEC c1d-4 multi 0.042 0.033 0.052 boundary 1.0
22 fp_beta_D P30052 411 QETLLCIAYVFEVAA                 CCEEEEEEEEEEEEC c1b-AT-4 multi 0.044 0.031 0.053 boundary 1.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment