P36328 | putative nonstructural protein nsP2   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D P36328 37 KLSCIHPLAEQVIVITH                   CCCCCCHHHHHHHHHHC c1c-AT-5 multi 0.057 0.048 0.215 boundary 0.0
2 fp_D P36328 37 KLSCIHPLAEQVIVIT                  CCCCCCHHHHHHHHHH c1a-AT-5 multi 0.058 0.048 0.212 boundary 0.0
3 fp_D P36328 37 KLSCIHPLAEQVIVIT                  CCCCCCHHHHHHHHHH c1d-5 multi 0.058 0.048 0.212 boundary 0.0
4 fp_D P36328 40 CIHPLAEQVIVITH                CCCHHHHHHHHHHC c3-4 multi-selected 0.05 0.041 0.204 boundary 0.0
5 fp_O P36328 81 DFQALSESATIVYN                HHHHHHCCCEEEEC c3-AT uniq 0.031 0.028 0.243 ORD 0.143
6 fp_D P36328 138 RKQCVKKELVTGLGLTG                   HHHHHHHHHHCCCCEEE c1c-4 uniq 0.11 0.041 0.23 boundary 0.0
7 fp_O P36328 217 IIRDVKKMKGLDVNA                 HHHHHHHCCCCCEEE c1b-5 uniq 0.043 0.026 0.217 ORD MID|Viral_helicase1 superfamily; 0.0
8 fp_beta_O P36328 223 KMKGLDVNARTVDS                HCCCCCEEEEECCE c3-AT multi 0.032 0.023 0.205 ORD MID|Viral_helicase1 superfamily; 0.571
9 fp_beta_O P36328 225 KGLDVNARTVDSVLLNG                   CCCCEEEEECCEEECCC c1c-AT-4 multi-selected 0.023 0.021 0.203 ORD MID|Viral_helicase1 superfamily; 0.75
10 fp_beta_O P36328 227 LDVNARTVDSVLLNG                 CCEEEEECCEEECCC c1b-AT-4 multi 0.018 0.018 0.195 ORD MID|Viral_helicase1 superfamily; 0.714
11 fp_O P36328 255 FACHAGTLRALIAIIR                  CCCCHHHHHHHHHHHC c1d-AT-4 uniq 0.01 0.006 0.057 ORD MID|Viral_helicase1 superfamily; 0.0
12 fp_O P36328 281 KQCGFFNMMCLKVHF                 CCCCCCCCCCCCCCC c1b-4 multi 0.06 0.042 0.038 ORD MID|Viral_helicase1 superfamily; 0.0
13 fp_O P36328 281 KQCGFFNMMCLKVHFNH                   CCCCCCCCCCCCCCCCC c1c-4 multi-selected 0.063 0.043 0.04 ORD MID|Viral_helicase1 superfamily; 0.0
14 fp_O P36328 282 QCGFFNMMCLKVHF                CCCCCCCCCCCCCC c2-4 multi-selected 0.064 0.043 0.037 ORD MID|Viral_helicase1 superfamily; 0.0
15 fp_O P36328 282 QCGFFNMMCLKVHFNH                  CCCCCCCCCCCCCCCC c1d-4 multi 0.066 0.043 0.039 ORD MID|Viral_helicase1 superfamily; 0.0
16 fp_O P36328 284 GFFNMMCLKVHFNHEI                  CCCCCCCCCCCCCCCC c1aR-4 multi-selected 0.073 0.044 0.04 ORD MID|Viral_helicase1 superfamily; 0.0
17 fp_O P36328 287 NMMCLKVHFNHEICTQV                   CCCCCCCCCCCCCCCCE c1cR-4 multi 0.071 0.043 0.055 ORD MID|Viral_helicase1 superfamily; 0.0
18 fp_D P36328 291 LKVHFNHEICTQVFHKS                   CCCCCCCCCCCCEEEEE c1cR-4 multi 0.059 0.039 0.076 boundary MID|Viral_helicase1 superfamily; 0.0
19 fp_beta_D P36328 352 DDLILTCFRGWVKQLQ                  CCEEEEEEHHHHHHHH c1aR-5 multi 0.04 0.029 0.107 boundary MID|Viral_helicase1 superfamily; 0.571
20 fp_D P36328 355 ILTCFRGWVKQLQIDY                  EEEEEHHHHHHHHHHC c1a-5 multi-selected 0.049 0.028 0.096 boundary MID|Viral_helicase1 superfamily; 0.143
21 fp_O P36328 397 NENPLYAPTSEHVNVLL                   CCCCCCCCCCCCEEEEE c1c-AT-4 uniq 0.011 0.045 0.313 ORD boundary|Viral_helicase1 superfamily; boundary|Peptidase_C9 superfamily; 0.0
22 fp_D P36328 481 ALVPVLKTAGIDMTT                 CCCCCCCCCCCCCCH c1b-AT-5 multi 0.084 0.05 0.19 boundary MID|Peptidase_C9 superfamily; 0.0
23 fp_D P36328 482 LVPVLKTAGIDMTT                CCCCCCCCCCCCCH c2-AT-5 multi-selected 0.08 0.051 0.194 boundary MID|Peptidase_C9 superfamily; 0.0
24 cand_D P36328 508 KAHSAEIVLNQLCVRF              +++ CCCCHHHHHCCEEEEE c1a-AT-4 multi 0.034 0.032 0.108 boundary MID|Peptidase_C9 superfamily; 0.0
25 cand_D P36328 508 KAHSAEIVLNQLCVRF              +++ CCCCHHHHHCCEEEEE c1d-AT-4 multi 0.034 0.032 0.108 boundary MID|Peptidase_C9 superfamily; 0.0
26 cand_D P36328 510 HSAEIVLNQLCVRF            +++ CCHHHHHCCEEEEE c2-4 multi 0.029 0.027 0.089 boundary MID|Peptidase_C9 superfamily; 0.143
27 fp_beta_D P36328 512 AEIVLNQLCVRFFGLD          +++++*+ HHHHHCCEEEEECCCC c1aR-5 multi 0.024 0.025 0.073 boundary MID|Peptidase_C9 superfamily; 0.571
28 cand_beta_D P36328 515 VLNQLCVRFFGLDLDS       +++++*+*++ HHCCEEEEECCCCCCC c1a-5 multi-selected 0.024 0.031 0.065 boundary MID|Peptidase_C9 superfamily; 0.714
29 cand_beta_D P36328 515 VLNQLCVRFFGLDL       +++++*+* HHCCEEEEECCCCC c2-5 multi 0.019 0.025 0.064 boundary MID|Peptidase_C9 superfamily; 0.714
30 cand_D P36328 517 NQLCVRFFGLDLDSGL     +++++*+*++.. CCEEEEECCCCCCCCC c1aR-4 multi 0.031 0.042 0.062 boundary MID|Peptidase_C9 superfamily; 0.429
31 cand_beta_D P36328 517 NQLCVRFFGLDLDS     +++++*+*++ CCEEEEECCCCCCC c2-4 multi 0.024 0.032 0.057 boundary MID|Peptidase_C9 superfamily; 0.571
32 fp_D P36328 625 FVSKLKGRTVLVVG .............. HHHHCCCCEEEEEE c3-AT multi 0.011 0.022 0.233 boundary boundary|Peptidase_C9 superfamily; 0.286
33 fp_beta_D P36328 629 LKGRTVLVVGEKLSVPG ................. CCCCEEEEEECCCCCCC c1c-AT-4 multi-selected 0.032 0.023 0.224 boundary boundary|Peptidase_C9 superfamily; 0.75
34 fp_beta_D P36328 630 KGRTVLVVGEKLSVPG ................ CCCEEEEEECCCCCCC c1d-4 multi 0.034 0.023 0.225 __ boundary|Peptidase_C9 superfamily; 0.714
35 fp_D P36328 728 ASESIIGAIARQFKFSR ................. CHHHHHHHHHHCEEEEE c1c-4 multi-selected 0.159 0.035 0.126 boundary 0.0
36 fp_D P36328 729 SESIIGAIARQFKFSR ................ HHHHHHHHHHCEEEEE c1a-AT-4 multi 0.167 0.034 0.128 boundary 0.0
37 fp_D P36328 729 SESIIGAIARQFKFSR ................ HHHHHHHHHHCEEEEE c1d-4 multi 0.167 0.034 0.128 boundary 0.0
38 fp_beta_D P36328 751 SHEETEVLFVFIGY .............. CCCCCEEEEEEEEE c2-AT-4 uniq 0.091 0.055 0.158 boundary 0.714

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment