P39940 | E3 ubiquitin-protein ligase RSP5   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_beta_D P39940 79 KDQGFLGVVNVRVGD                 CCCCEEEEEEEECCC c1b-4 multi 0.032 0.047 0.341 boundary MID|HUL4; 1.0
2 fp_beta_D P39940 80 DQGFLGVVNVRVGD                CCCEEEEEEEECCC c2-4 multi-selected 0.031 0.044 0.344 boundary MID|HUL4; 1.0
3 fp_beta_D P39940 83 FLGVVNVRVGDVLG                EEEEEEEECCCCCC c3-4 multi-selected 0.044 0.05 0.37 boundary MID|HUL4; 0.714
4 fp_beta_D P39940 123 DGMAVSGRLIVVLSKLP                   CCCCEECCEEEECCCCC c1cR-5 uniq 0.873 0.445 0.503 DISO MID|HUL4; 0.75
5 fp_D P39940 393 WEMRLTNTARVYFVD                 CCEEECCCCCEECCC c1b-AT-4 uniq 0.061 0.08 0.349 boundary MID|HUL4; 0.286
6 fp_O P39940 472 IMRQTPEDLKKRLMIKF                   HHCCCHHHHHCEEEEEE c1c-AT-5 uniq 0.022 0.033 0.263 ORD MID|HUL4; 0.125
7 fp_O P39940 503 FFFLLSHEMFNPFYCLF                   HHHHHHHHHCCCCEEEE c1cR-5 uniq 0.013 0.007 0.013 ORD MID|HUL4; 0.0
8 fp_O P39940 541 HLNYFKFIGRVVGLGV                  CCCCEEEHHHHHHHHH c1d-5 multi 0.01 0.01 0.037 ORD MID|HUL4; 0.429
9 fp_O P39940 543 NYFKFIGRVVGLGVFH                  CCEEEHHHHHHHHHHC c1a-4 multi-selected 0.01 0.008 0.024 ORD MID|HUL4; 0.143
10 fp_O P39940 544 YFKFIGRVVGLGVFH                 CEEEHHHHHHHHHHC c1b-5 multi 0.01 0.008 0.018 ORD MID|HUL4; 0.0
11 fp_D P39940 550 RVVGLGVFHRRFLDAF                  HHHHHHHHCCCCCCCC c1aR-4 multi-selected 0.01 0.008 0.009 boundary MID|HUL4; 0.0
12 fp_D P39940 553 GLGVFHRRFLDAFFVGA                   HHHHHCCCCCCCCCHHH c1c-5 multi-selected 0.011 0.009 0.008 boundary MID|HUL4; 0.0
13 fp_D P39940 561 FLDAFFVGALYKMMLRK                   CCCCCCHHHHHHHHHCC c1c-AT-5 multi 0.036 0.016 0.011 boundary MID|HUL4; 0.0
14 fp_D P39940 562 LDAFFVGALYKMMLRK                  CCCCCHHHHHHHHHCC c1a-4 multi-selected 0.038 0.016 0.011 boundary MID|HUL4; 0.0
15 fp_D P39940 562 LDAFFVGALYKMMLRK                  CCCCCHHHHHHHHHCC c1d-AT-4 multi 0.038 0.016 0.011 boundary MID|HUL4; 0.0
16 fp_D P39940 563 DAFFVGALYKMMLRKK                  CCCCHHHHHHHHHCCC c1aR-4 multi-selected 0.051 0.018 0.014 boundary MID|HUL4; 0.0
17 fp_D P39940 563 DAFFVGALYKMMLRK                 CCCCHHHHHHHHHCC c1b-4 multi 0.039 0.017 0.012 boundary MID|HUL4; 0.0
18 fp_D P39940 595 LNWMLENSIDGVLDLTF                   HHHHHCCCCCCCEEEEE c1c-4 multi-selected 0.016 0.03 0.076 __ MID|HUL4; 0.0
19 fp_D P39940 599 LENSIDGVLDLTFSA                 HCCCCCCCEEEEEEE c1b-4 multi 0.02 0.032 0.077 boundary MID|HUL4; 0.429
20 fp_beta_O P39940 614 DDERFGEVVTVDLKP                 CCCCCCCEEEEECCC c1b-4 uniq 0.03 0.07 0.204 ORD MID|HUL4; 0.571
21 fp_O P39940 652 IVDRVQEQFKAFMD              . ECHHHHHHHHHHHH c3-4 uniq 0.049 0.021 0.092 ORD MID|HUL4; 0.0
22 fp_O P39940 659 QFKAFMDGFNELIP       ........ HHHHHHHCCCCCCC c3-4 uniq 0.05 0.019 0.122 ORD MID|HUL4; 0.0
23 cand_O P39940 683 ELELLIGGIAEIDIED ...........*.*.. HHHHHHHCCCCCCHHH c1a-5 multi-selected 0.016 0.025 0.135 ORD MID|HUL4; 0.0
24 cand_O P39940 684 LELLIGGIAEIDIED ..........*.*.. HHHHHHCCCCCCHHH c1b-4 multi 0.015 0.025 0.135 ORD MID|HUL4; 0.0
25 fp_D P39940 772 PKSHTCFNRVDLPQ                CCCCCCCCCCCCCC c2-AT-4 uniq 0.041 0.057 0.283 boundary MID|HUL4; 0.0
26 fp_D P39940 792 MKQKLTLAVEETIGFGQ                   HHHHHHHHHHHCCCCCC c1c-4 multi-selected 0.232 0.201 0.287 boundary boundary|HUL4; 0.0
27 fp_D P39940 793 KQKLTLAVEETIGFGQ                  HHHHHHHHHHCCCCCC c1d-AT-4 multi 0.242 0.208 0.287 boundary boundary|HUL4; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment