P40692 | DNA mismatch repair protein Mlh1   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D P40692 1 XMSFVAGVIRRLDE                CCCCCCCCCCCCHH c3-4-Nt multi-selected 0.284 0.315 0.078 boundary boundary|mutl; 0.0
2 fp_D P40692 1 XXMSFVAGVIRRLDETV                   CCCCCCCCCCCCHHHHH c1cR-4-Nt multi 0.238 0.276 0.087 boundary boundary|mutl; 0.0
3 fp_beta_D P40692 103 ALASISHVAHVTITT                 CCCCCCCEEEEEEEE c1b-5 uniq 0.043 0.031 0.241 boundary MID|mutl; 0.571
4 fp_O P40692 181 GRYSVHNAGISFSVKK                  HHHHHCCCCCEEEEEE c1d-AT-4 uniq 0.011 0.014 0.186 ORD MID|mutl; 0.143
5 fp_O P40692 245 YISNANYSVKKCIFLLF                   EEECCCCCCCCCEEEEE c1c-AT-5 multi 0.024 0.028 0.044 ORD MID|mutl; 0.0
6 fp_O P40692 249 ANYSVKKCIFLLFINH                  CCCCCCCCEEEEEEEC c1a-4 multi-selected 0.024 0.028 0.027 ORD MID|mutl; 0.429
7 fp_beta_O P40692 255 KCIFLLFINHRLVEST                  CCEEEEEEECCEECCH c1aR-4 uniq 0.014 0.015 0.04 ORD MID|mutl; 0.714
8 fp_beta_D P40692 284 LPKNTHPFLYLSLEI                 CCCCCCCEEEEEEEE c1b-AT-4 multi 0.01 0.014 0.156 boundary boundary|mutl; 0.571
9 fp_beta_D P40692 284 LPKNTHPFLYLSLEISP                   CCCCCCCEEEEEEEECC c1c-AT-4 multi-selected 0.01 0.014 0.163 boundary boundary|mutl; 0.625
10 fp_D P40692 303 VDVNVHPTKHEVHFLH                  CCCCCCCCCCCEECCC c1d-AT-4 multi 0.104 0.038 0.403 boundary boundary|mutl; 0.0
11 fp_D P40692 306 NVHPTKHEVHFLHE                CCCCCCCCEECCCH c3-AT multi-selected 0.1 0.043 0.399 boundary boundary|mutl; 0.286
12 fp_D P40692 340 SRMYFTQTLLPGLAGPS                   CCCCCCCCCCCCCCCCC c1cR-4 uniq 0.699 0.651 0.383 boundary boundary|mutl; 0.0
13 fp_D P40692 496 PRRRIINLTSVLSLQE                  CCCCCCCCHHHHHHHH c1a-AT-4 multi-selected 0.433 0.357 0.387 boundary boundary|Mlh1_C; 0.0
14 fp_D P40692 496 PRRRIINLTSVLSLQE                  CCCCCCCCHHHHHHHH c1d-4 multi 0.433 0.357 0.387 boundary boundary|Mlh1_C; 0.0
15 fp_D P40692 497 RRRIINLTSVLSLQE                 CCCCCCCHHHHHHHH c1b-AT-4 multi 0.416 0.333 0.384 boundary boundary|Mlh1_C; 0.0
16 fp_O P40692 551 NTTKLSEELFYQILIYD                   ECHHHHHHHHHHHHHHH c1c-4 uniq 0.01 0.011 0.053 ORD MID|Mlh1_C; 0.0
17 fp_D P40692 560 FYQILIYDFANFGVLR                  HHHHHHHHHCCCCEEE c1a-4 multi-selected 0.017 0.023 0.024 boundary MID|Mlh1_C; 0.0
18 fp_D P40692 561 YQILIYDFANFGVLR                 HHHHHHHHCCCCEEE c1b-4 multi 0.017 0.024 0.023 boundary MID|Mlh1_C; 0.0
19 fp_D P40692 564 LIYDFANFGVLRLSE                 HHHHHCCCCEEECCC c1b-5 multi 0.025 0.034 0.025 boundary MID|Mlh1_C; 0.286
20 fp_D P40692 565 IYDFANFGVLRLSE                HHHHCCCCEEECCC c2-AT-4 multi 0.026 0.035 0.026 boundary MID|Mlh1_C; 0.286
21 cand_D P40692 576 LSEPAPLFDLAMLA       *++*++*+ CCCCCCHHHHHHHH c2-AT-4 multi 0.062 0.051 0.109 boundary MID|Mlh1_C; 0.0
22 cand_D P40692 578 EPAPLFDLAMLALDS     *++*++*+*+  CCCCHHHHHHHHCCC c1b-4 multi 0.087 0.055 0.135 boundary MID|Mlh1_C; 0.0
23 cand_D P40692 579 PAPLFDLAMLALDS    *++*++*+*+  CCCHHHHHHHHCCC c2-4 multi-selected 0.089 0.055 0.143 boundary MID|Mlh1_C; 0.0
24 fp_D P40692 611 IVEFLKKKAEMLAD                HHHHHHHHHHHHHC c3-AT multi-selected 0.012 0.013 0.064 boundary MID|Mlh1_C; 0.0
25 fp_D P40692 615 LKKKAEMLADYFSLEI                  HHHHHHHHHCCCCEEE c1d-AT-4 multi 0.013 0.011 0.069 boundary MID|Mlh1_C; 0.0
26 fp_D P40692 617 KKAEMLADYFSLEI                HHHHHHHCCCCEEE c2-AT-4 multi-selected 0.013 0.011 0.074 boundary MID|Mlh1_C; 0.0
27 fp_O P40692 649 PLEGLPIFILRLAT                CCCCHHHHHHHHCC c2-5 multi-selected 0.016 0.025 0.051 ORD MID|Mlh1_C; 0.0
28 fp_O P40692 649 PLEGLPIFILRLAT                CCCCHHHHHHHHCC c3-4 multi-selected 0.016 0.025 0.051 ORD MID|Mlh1_C; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment