P40957 | Spindle assembly checkpoint component MAD1   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D P40957 1 XXMDVRAALQCFFSALS                   CHHHHHHHHHHHHHCCC c1cR-5-Nt uniq 0.424 0.165 0.08 DISO 0.0
2 fp_beta_D P40957 23 LGLEIYSIQYKMSNSG                  CCCEEEEEEEECCCCC c1aR-4 uniq 0.283 0.173 0.256 DISO 1.0
3 fp_D P40957 60 SNRQIQALQFKLNT                HHHHHHHHHEECCC c2-AT-4 multi 0.084 0.257 0.402 DISO boundary|SMC_N superfamily; 0.143
4 fp_D P40957 63 QIQALQFKLNTLQN                HHHHHHEECCCCCC c3-4 multi-selected 0.041 0.216 0.352 DISO boundary|SMC_N superfamily; 0.286
5 fp_D P40957 246 IQDQVQYTKELELAN                 HHHHHHHHHHHHHHH c1b-AT-4 uniq 0.087 0.335 0.538 DISO MID|SMC_N superfamily; 0.0
6 fp_D P40957 283 ENEKLQNKLSQLHVLE                  HHHHHHHHHHHHHHHH c1a-4 uniq 0.177 0.604 0.494 DISO MID|SMC_N superfamily; 0.0
7 fp_D P40957 300 QYENLQLENIDLKS                HHHHHHHHHHHHHH c2-4 uniq 0.085 0.695 0.429 DISO MID|SMC_N superfamily; 0.0
8 fp_D P40957 385 KECLILTDMNDKLRLDN                   HHHHHHHHHHHHHHHCH c1c-4 multi-selected 0.116 0.54 0.378 DISO MID|SMC_N superfamily; 0.0
9 fp_D P40957 386 ECLILTDMNDKLRLDN                  HHHHHHHHHHHHHHCH c1aR-4 multi-selected 0.121 0.543 0.385 DISO MID|SMC_N superfamily; 0.0
10 fp_D P40957 386 ECLILTDMNDKLRLDN                  HHHHHHHHHHHHHHCH c1d-4 multi 0.121 0.543 0.385 DISO MID|SMC_N superfamily; 0.0
11 fp_D P40957 400 DNNNLKLLNDEMALER                  CHHHHHHHHHHHHHHH c1d-4 uniq 0.209 0.503 0.51 DISO MID|SMC_N superfamily; 0.0
12 fp_D P40957 428 NIVNLKRLNHELEQQK                  CCHHHHHHHHHHHHHH c1aR-4 uniq 0.135 0.297 0.518 DISO MID|SMC_N superfamily; 0.0
13 fp_D P40957 540 RLNELQLENVSVSR                HHHHHHHHHHHHHH c2-5 uniq 0.139 0.377 0.361 DISO MID|SMC_N superfamily; 0.0
14 cand_D P40957 551 VSRELSKAQTTIQLLQ             ++++ HHHHHHHHHHHHHHHH c1d-AT-4 multi 0.119 0.325 0.343 boundary MID|SMC_N superfamily; 0.0
15 cand_D P40957 554 ELSKAQTTIQLLQE          +++++ HHHHHHHHHHHHHH c3-AT multi-selected 0.119 0.315 0.332 boundary MID|SMC_N superfamily; 0.0
16 cand_D P40957 561 TIQLLQEKLEKLTK   ++++++*+++++ HHHHHHHHHHHHHC c3-4 uniq 0.139 0.282 0.293 boundary MID|SMC_N superfamily; 0.0
17 fp_D P40957 621 AVETVPISVYDSLNFEL                   CCCCCCHHHHHHHHHHH c1c-5 uniq 0.224 0.155 0.163 boundary MID|SMC_N superfamily; 0.0
18 fp_D P40957 633 LNFELKQFEQEVFKSN                  HHHHHHHHHHHHHHHH c1aR-4 uniq 0.205 0.158 0.102 boundary MID|SMC_N superfamily; 0.0
19 fp_D P40957 661 KSLEFIDVVNSLLGFKL                   HHHHHHHHHHHHHCEEE c1c-4 multi 0.015 0.025 0.034 boundary MID|SMC_N superfamily; 0.0
20 fp_D P40957 661 KSLEFIDVVNSLLGFKL                   HHHHHHHHHHHHHCEEE c1cR-4 multi 0.015 0.025 0.034 boundary MID|SMC_N superfamily; 0.0
21 fp_D P40957 661 KSLEFIDVVNSLLGFK                  HHHHHHHHHHHHHCEE c1aR-5 multi 0.015 0.026 0.033 boundary MID|SMC_N superfamily; 0.0
22 fp_D P40957 662 SLEFIDVVNSLLGFKL                  HHHHHHHHHHHHCEEE c1d-5 multi 0.013 0.023 0.033 boundary MID|SMC_N superfamily; 0.0
23 fp_D P40957 664 EFIDVVNSLLGFKLEF                  HHHHHHHHHHCEEEEE c1a-5 multi-selected 0.011 0.019 0.031 boundary MID|SMC_N superfamily; 0.0
24 fp_D P40957 665 FIDVVNSLLGFKLEF                 HHHHHHHHHCEEEEE c1b-5 multi 0.01 0.018 0.031 boundary MID|SMC_N superfamily; 0.143
25 fp_D P40957 665 FIDVVNSLLGFKLEFQQ                   HHHHHHHHHCEEEEEEE c1c-5 multi 0.01 0.02 0.03 boundary MID|SMC_N superfamily; 0.25
26 fp_D P40957 727 DRGQLPCFLATITLRL                  HCCCHHHHHHHHHHHH c1a-4 multi-selected 0.045 0.02 0.045 boundary boundary|SMC_N superfamily; 0.0
27 fp_D P40957 727 DRGQLPCFLATITLRL                  HCCCHHHHHHHHHHHH c1d-4 multi 0.045 0.02 0.045 boundary boundary|SMC_N superfamily; 0.0
28 fp_D P40957 730 QLPCFLATITLRLWE                 CHHHHHHHHHHHHHH c1b-AT-5 multi 0.057 0.024 0.043 boundary boundary|SMC_N superfamily; 0.0
29 fp_D P40957 731 LPCFLATITLRLWE                HHHHHHHHHHHHHH c2-AT-4 multi 0.06 0.024 0.045 boundary boundary|SMC_N superfamily; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment