P51587 | Breast cancer type 2 susceptibility protein   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D P51587 91 YQSPVKELDKFKLDL                 CCCCCCCHHHHHCCC c1b-4 uniq 0.915 0.845 0.382 DISO 0.0
2 fp_D P51587 196 SSLATPPTLSSTVLIVR                   CCCCCCCCCCCEEEEEC c1c-AT-4 uniq 0.75 0.542 0.488 DISO 0.125
3 fp_D P51587 402 GLNGAQMEKIPLLH                CCCCCCCCCCCCCC c2-AT-5 uniq 0.954 0.899 0.391 DISO 0.0
4 fp_D P51587 470 EEQHLESHTDCILAVKQ                   CCCCCCCCCCCCCCCCC c1c-AT-4 uniq 0.966 0.967 0.441 DISO 0.0
5 fp_D P51587 497 SFQGIKKSIFRIRE                CCCCCCCCEEEECC c3-4 uniq 0.908 0.912 0.361 DISO 0.286
6 fp_D P51587 579 LISTLKKKTNKFIY                CCCCCCCCCCCEEE c3-AT uniq 0.613 0.708 0.247 DISO 0.0
7 fp_D P51587 770 ILTPTSKDVLSNLVMIS                   CCCCCCCCCCCCEEEEE c1c-AT-5 uniq 0.965 0.779 0.39 DISO 0.0
8 fp_beta_D P51587 863 NQEETTSISKITVNP                 CCCCCCCEEEEECCC c1b-AT-4 multi 0.936 0.822 0.545 DISO 0.571
9 fp_beta_D P51587 864 QEETTSISKITVNP                CCCCCCEEEEECCC c2-AT-4 multi-selected 0.938 0.825 0.547 DISO 0.571
10 fp_D P51587 963 IKMTLGQDLKSDISLNI                   CCCCCCCCCCCCCCCCC c1cR-4 multi 0.938 0.895 0.382 DISO 0.0
11 fp_D P51587 963 IKMTLGQDLKSDISLNI                   CCCCCCCCCCCCCCCCC c1c-4 multi-selected 0.938 0.895 0.382 DISO 0.0
12 fp_D P51587 1036 EQYPTSLACVEIVN                HHCCCCCCEEEECC c2-AT-4 multi 0.938 0.57 0.2 DISO 0.286
13 fp_beta_D P51587 1039 PTSLACVEIVNTLALDN                   CCCCCEEEECCCCCCCH c1c-AT-4 multi-selected 0.954 0.706 0.231 DISO 0.5
14 fp_D P51587 1041 SLACVEIVNTLALDN                 CCCEEEECCCCCCCH c1b-5 multi 0.955 0.737 0.242 DISO 0.429
15 fp_D P51587 1064 SINTVSAHLQSSVVVSD                   CCCCCCCCCCCCEEECC c1c-5 uniq 0.972 0.906 0.374 DISO 0.0
16 fp_D P51587 1227 LNVSTEALQKAVKLFS                  EEECHHHHHHHHHHHC c1d-AT-4 uniq 0.928 0.88 0.33 DISO small|BRCA2; 0.0
17 fp_D P51587 1233 ALQKAVKLFSDIEN                HHHHHHHHHCCCCC c3-AT uniq 0.944 0.825 0.346 DISO 0.0
18 cand_D P51587 1376 GNTQIKEDLSDLTFLE        +*++*++++ CCCCCCCCCCCCCHHH c1a-4 multi-selected 0.923 0.961 0.381 DISO 0.0
19 cand_D P51587 1380 IKEDLSDLTFLEVAK    +*++*++++++  CCCCCCCCCHHHHHH c1b-4 multi 0.893 0.951 0.358 DISO 0.0
20 fp_D P51587 1435 NISVAKESFNKIVNFFD                   CCEECHHHHHHHHHCCC c1c-AT-5 multi-selected 0.802 0.727 0.288 DISO small|BRCA2; 0.0
21 fp_D P51587 1435 NISVAKESFNKIVN                CCEECHHHHHHHHH c3-AT multi 0.783 0.779 0.278 DISO small|BRCA2; 0.143
22 fp_D P51587 1458 HNFSLNSELHSDIRKNK                   CCCCCCCCCCCCCCCCC c1cR-4 uniq 0.985 0.941 0.432 DISO 0.0
23 fp_D P51587 1531 KVKIAKESLDKVKN                CEEECHHHHHHHHH c3-AT uniq 0.81 0.728 0.34 DISO small|BRCA2; 0.143
24 fp_D P51587 1572 ACKDLELACETIEITA                  CCCHHHHHHHHHHCCC c1d-AT-4 uniq 0.892 0.87 0.209 DISO 0.0
25 fp_beta_D P51587 1625 ENLKTSKSIFLKVKVHE                   CCCCCCCCEEEEEEECC c1c-AT-4 uniq 0.966 0.904 0.304 DISO 0.5
26 fp_D P51587 1843 AFRIASGKIVCVSH                CEEECCCCEEEECH c3-AT uniq 0.826 0.758 0.201 DISO small|BRCA2; 0.429
27 fp_D P51587 1992 SLQNARQVFSEIED                HHHHHHHHHHHCCC c3-AT uniq 0.852 0.806 0.363 DISO 0.0
28 fp_D P51587 1999 VFSEIEDSTKQVFS                HHHHCCCCCCCCCC c3-AT multi 0.919 0.8 0.299 DISO 0.0
29 fp_D P51587 2003 IEDSTKQVFSKVLFKS                  CCCCCCCCCCCCCCCC c1a-AT-4 multi-selected 0.961 0.864 0.303 DISO 0.0
30 fp_D P51587 2003 IEDSTKQVFSKVLFKS                  CCCCCCCCCCCCCCCC c1d-AT-4 multi 0.961 0.864 0.303 DISO 0.0
31 fp_D P51587 2065 QVSILESSLHKVKG                EEEECHHHHHHHHH c3-4 uniq 0.756 0.77 0.277 DISO small|BRCA2; 0.143
32 fp_D P51587 2072 SLHKVKGVLEEFDLIR                  HHHHHHHHHHHHHCCC c1a-5 multi-selected 0.825 0.721 0.272 DISO 0.0
33 fp_D P51587 2072 SLHKVKGVLEEFDLIR                  HHHHHHHHHHHHHCCC c1d-5 multi 0.825 0.721 0.272 DISO 0.0
34 fp_D P51587 2075 KVKGVLEEFDLIRT                HHHHHHHHHHCCCC c3-4 multi 0.869 0.71 0.275 DISO 0.0
35 fp_D P51587 2165 LVLGTKVSLVENIHVLG                   HCCCCCCCHHHCCCCCC c1c-AT-5 multi-selected 0.963 0.811 0.356 DISO 0.0
36 fp_D P51587 2167 LGTKVSLVENIHVLG                 CCCCCCHHHCCCCCC c1b-4 multi 0.963 0.805 0.356 DISO 0.0
37 fp_D P51587 2219 SENYFETEAVEIAK                CHHHHHHHHHHHHH c2-AT-4 uniq 0.849 0.682 0.348 DISO 0.0
38 fp_D P51587 2316 KDRRLFMHHVSLEP                CCCCCCCCCCCCCC c2-4 uniq 0.769 0.652 0.358 DISO 0.0
39 fp_D P51587 2415 HFHRVEQCVRNINLEE                  CCCCCCCCCCCCCCCC c1a-5 uniq 0.953 0.74 0.474 DISO 0.0
40 fp_D P51587 2483 SLQNARDIQDMRIKK                 HHHHHHHHHHHHHHC c1b-AT-5 uniq 0.923 0.579 0.489 DISO boundary|BRCA-2_helical; 0.0
41 fp_beta_D P51587 2682 AAKTLVLCVSDIISLSA                   CCCEEEEEEEEEECCCC c1c-4 multi-selected 0.245 0.11 0.092 boundary boundary|BRCA-2_helical; boundary|BRCA-2_OB1; 1.0
42 fp_beta_D P51587 2683 AKTLVLCVSDIISLSA                  CCEEEEEEEEEECCCC c1d-4 multi 0.251 0.112 0.088 boundary boundary|BRCA-2_helical; boundary|BRCA-2_OB1; 1.0
43 fp_beta_D P51587 2709 SSADTQKVAIIELTD                 CCCCCCCEEEEEECC c1b-AT-4 uniq 0.367 0.277 0.256 boundary MID|BRCA-2_OB1; 0.571
44 fp_D P51587 2827 PIQWMEKTSSGLYIFR                  CCEEEEECCCCCCCCC c1d-AT-5 multi 0.494 0.061 0.246 DISO boundary|BRCA-2_OB1; MID|BRCA2DBD_OB2; 0.429
45 fp_D P51587 2830 WMEKTSSGLYIFRN                EEEECCCCCCCCCC c3-AT multi-selected 0.526 0.077 0.281 DISO MID|BRCA2DBD_OB2; 0.143
46 fp_D P51587 3053 EPLHFSKFLDPDFQPSC                   CCEECCCCCCCCCCCCC c1cR-4 uniq 0.104 0.027 0.12 boundary boundary|BRCA2DBD_OB2; boundary|BRCA-2_OB3; 0.0
47 fp_beta_D P51587 3068 SCSEVDLIGFVVSV                CCCCCEEEEEEEEE c2-4 multi-selected 0.037 0.01 0.052 boundary boundary|BRCA2DBD_OB2; boundary|BRCA-2_OB3; 0.714
48 fp_beta_D P51587 3068 SCSEVDLIGFVVSVVK                  CCCCCEEEEEEEEEEC c1d-4 multi 0.038 0.013 0.047 boundary boundary|BRCA2DBD_OB2; boundary|BRCA-2_OB3; 0.857
49 fp_beta_D P51587 3070 SEVDLIGFVVSVVKKT                  CCCEEEEEEEEEECCC c1aR-4 multi-selected 0.031 0.017 0.043 boundary boundary|BRCA2DBD_OB2; boundary|BRCA-2_OB3; 1.0
50 fp_beta_D P51587 3071 EVDLIGFVVSVVKK                CCEEEEEEEEEECC c3-4 multi-selected 0.028 0.014 0.045 boundary boundary|BRCA2DBD_OB2; boundary|BRCA-2_OB3; 1.0
51 fp_beta_D P51587 3096 ECYNLLAIKFWIDL                CCCCEEEEEEECCC c2-AT-4 uniq 0.032 0.012 0.019 boundary MID|BRCA-2_OB3; 0.857
52 fp_beta_D P51587 3131 SKSGLLTLFAGDFSVFS                   CCCCCCEEEECCCEEEE c1c-4 multi-selected 0.099 0.034 0.103 boundary MID|BRCA-2_OB3; 0.5
53 fp_beta_D P51587 3132 KSGLLTLFAGDFSVFS                  CCCCCEEEECCCEEEE c1a-AT-4 multi 0.09 0.031 0.099 boundary MID|BRCA-2_OB3; 0.571
54 fp_beta_D P51587 3132 KSGLLTLFAGDFSVFS                  CCCCCEEEECCCEEEE c1d-4 multi 0.09 0.031 0.099 boundary MID|BRCA-2_OB3; 0.571
55 fp_beta_D P51587 3134 GLLTLFAGDFSVFS                CCCEEEECCCEEEE c2-AT-5 multi 0.082 0.024 0.09 boundary MID|BRCA-2_OB3; 0.571
56 fp_beta_D P51587 3135 LLTLFAGDFSVFSA                CCEEEECCCEEEEC c3-4 multi-selected 0.096 0.024 0.092 boundary MID|BRCA-2_OB3; 0.571
57 fp_D P51587 3158 TFNKMKNTVENIDILC                  HHHHHHHHHHHHHHHH c1a-5 multi-selected 0.119 0.166 0.294 boundary boundary|BRCA-2_OB3; 0.0
58 fp_D P51587 3158 TFNKMKNTVENIDILC                  HHHHHHHHHHHHHHHH c1d-AT-5 multi 0.119 0.166 0.294 boundary boundary|BRCA-2_OB3; 0.0
59 fp_D P51587 3161 KMKNTVENIDILCN                HHHHHHHHHHHHHH c3-AT multi 0.09 0.174 0.249 DISO boundary|BRCA-2_OB3; 0.0
60 fp_D P51587 3203 YTAQIIPGTGNKLLMSS                   CCCCCCCCCCCCCCCCC c1c-AT-4 multi-selected 0.963 0.768 0.356 DISO boundary|BRCA-2_OB3; 0.0
61 fp_D P51587 3204 TAQIIPGTGNKLLMSS                  CCCCCCCCCCCCCCCC c1d-AT-4 multi 0.963 0.765 0.347 DISO boundary|BRCA-2_OB3; 0.0
62 fp_D P51587 3321 QMTPFKKFNEISLLE                 CCCCCCCCCCCCCCC c1b-5 uniq 0.959 0.896 0.42 DISO 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment