P56693 | Transcription factor SOX-10   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D P56693 100 SKPHVKRPMNAFMVWA                  CCCCCCCCCHHHHHHH c1a-4 uniq 0.626 0.968 0.543 DISO boundary|Sox_N; boundary|SOX-TCF_HMG-box; 0.0
2 fp_D P56693 149 DKRPFIEEAERLRMQH                  CCCCCHHHHHHHHHHC c1a-AT-4 multi-selected 0.379 0.914 0.668 DISO boundary|SOX-TCF_HMG-box; 0.0
3 fp_D P56693 150 KRPFIEEAERLRMQH                 CCCCHHHHHHHHHHC c1b-AT-4 multi 0.39 0.916 0.677 DISO boundary|SOX-TCF_HMG-box; 0.0
4 fp_D P56693 267 GKPHIDFGNVDIGE                CCCCCCCCCCCCCC c2-4 uniq 0.825 0.969 0.739 DISO 0.0
5 fp_D P56693 281 ISHEVMSNMETFDVAE                  CCCCCCCCCCCCCCCC c1a-4 multi-selected 0.916 0.947 0.62 DISO 0.0
6 fp_D P56693 282 SHEVMSNMETFDVAE                 CCCCCCCCCCCCCCC c1b-4 multi 0.918 0.947 0.619 DISO 0.0
7 fp_D P56693 290 ETFDVAELDQYLPPNG                  CCCCCCCCCCCCCCCC c1aR-4 uniq 0.95 0.964 0.673 DISO 0.0
8 fp_D P56693 312 SYSAAGYGLGSALAVAS                   CCCCCCCCCCCCCCCCC c1c-AT-4 uniq 0.949 0.957 0.454 DISO 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment