*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)
| # | candidates | id | start# | sequence | secondary | class | multi-pattern | diso | spotd | iup | loc_DISO | loc_CDD | beta |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | fp_D | P59636 | 5 | QTNVVPPALHLVDPQIQL | CCCCCCCCCCCCCCCEEE | c4-4 | uniq | 0.071 | 0.335 | 0.449 | DISO | boundary|SARS_lipid_bind; | 0.0 |
| 2 | fp_beta_D | P59636 | 20 | IQLTITRMEDAMGQGQ | EEEEEEEEHHHHHCCC | c1aR-4 | uniq | 0.051 | 0.392 | 0.522 | boundary | boundary|SARS_lipid_bind; | 0.571 |
| 3 | cand_beta_D | P59636 | 41 | KVYPIILRLGSQLSLSM +*+*+++*+* | CEEEEEEEECCCCHHHH | c1c-5 | multi-selected | 0.016 | 0.135 | 0.261 | boundary | MID|SARS_lipid_bind; | 0.625 |
| 4 | cand_beta_D | P59636 | 42 | VYPIILRLGSQLSLSM +*+*+++*+* | EEEEEEEECCCCHHHH | c1d-4 | multi | 0.016 | 0.13 | 0.253 | boundary | MID|SARS_lipid_bind; | 0.571 |
| 5 | fp_D | P59636 | 54 | SLSMARRNLDSLEA +* | HHHHHHHCCCHHHH | c3-AT | uniq | 0.036 | 0.215 | 0.345 | boundary | MID|SARS_lipid_bind; | 0.0 |
*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment