Q02085 | Zinc finger protein SNAI1   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D Q02085 18 NYSELQDACVEFTFQQ                  CCCCCCCCCCCCCCCC c1d-AT-4 uniq 0.524 0.932 0.433 DISO 0.0
2 cand_D Q02085 131 GLGQLPKQLARLSVAK .+++++++*++*+... CCCCCCCCCCCCCCCC c1a-5 uniq 0.247 0.747 0.325 DISO 0.0
3 fp_D Q02085 160 NKEYLSLGALKMHI                CCCCCCCCCCHHHC c2-4 multi-selected 0.038 0.24 0.117 DISO boundary|COG5048; 0.0
4 fp_D Q02085 160 NKEYLSLGALKMHIRS                  CCCCCCCCCCHHHCCC c1a-AT-4 multi 0.043 0.239 0.117 DISO boundary|COG5048; 0.0
5 fp_D Q02085 162 EYLSLGALKMHIRSHT                  CCCCCCCCHHHCCCCC c1aR-4 multi-selected 0.057 0.238 0.123 DISO boundary|COG5048; 0.0
6 fp_D Q02085 162 EYLSLGALKMHIRS                CCCCCCCCHHHCCC c2-AT-4 multi 0.046 0.242 0.125 DISO boundary|COG5048; 0.0
7 fp_D Q02085 238 CQACARTFSRMSLLH                 CCCCCHHHHCCCCCC c1b-AT-4 uniq 0.089 0.412 0.132 DISO boundary|COG5048; 0.0

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment