Q04360 | mRNA export factor EB2   proviz   swissmodel

*Experimental: mutation (blue); functional region (cyan); located in the long functional sequence (lightblue)
*NES patterns: region with experimental evidence (red-orange-yellow); false positive region (gray)


# candidates id start# sequence secondary class multi-pattern diso spotd iup loc_DISO loc_CDD beta
1 fp_D Q04360 74 PSSVVITPTSASFVIPR                   CCCCCCCCCCCCCCCCC c1c-AT-4 multi-selected 0.856 0.938 0.648 DISO 0.0
2 fp_D Q04360 75 SSVVITPTSASFVIPR                  CCCCCCCCCCCCCCCC c1d-AT-4 multi 0.852 0.937 0.634 DISO 0.0
3 cand_D Q04360 211 FDMSLVKPVSKITFVT        +++++++** CCCCCCCCCCCCCCCC c1a-4 multi-selected 0.532 0.409 0.35 DISO 0.0
4 cand_D Q04360 212 DMSLVKPVSKITFVT       +++++++** CCCCCCCCCCCCCCC c1b-5 multi 0.532 0.399 0.336 DISO 0.0
5 cand_D Q04360 215 LVKPVSKITFVTLPS    +++++++***++ CCCCCCCCCCCCCCC c1b-5 multi 0.548 0.342 0.318 DISO 0.0
6 cand_D Q04360 220 SKITFVTLPSPLASLT +++++***++++++** CCCCCCCCCCCCCCCC c1aR-5 multi 0.543 0.263 0.337 DISO 0.0
7 cand_D Q04360 223 TFVTLPSPLASLTLEP ++***++++++***   CCCCCCCCCCCCCCCC c1a-5 multi-selected 0.527 0.24 0.353 DISO boundary|Herpes_UL69; 0.0
8 fp_O Q04360 307 MLEETIFWLQEITY                HHHHHHHHHHHHHH c3-AT uniq 0.01 0.01 0.033 ORD MID|Herpes_UL69; 0.0
9 fp_O Q04360 322 GDLPLAPAEDILLAC                 CCCCCCCCCCCHHCC c1b-AT-4 uniq 0.01 0.044 0.049 ORD MID|Herpes_UL69; 0.0
10 fp_O Q04360 328 PAEDILLACAMSLSK                 CCCCCHHCCHHHHHH c1b-AT-4 multi 0.01 0.027 0.036 ORD MID|Herpes_UL69; 0.0
11 fp_O Q04360 329 AEDILLACAMSLSK                CCCCHHCCHHHHHH c2-AT-4 multi 0.01 0.024 0.036 ORD MID|Herpes_UL69; 0.0
12 fp_O Q04360 333 LLACAMSLSKVILTK                 HHCCHHHHHHHHHHH c1b-AT-5 multi 0.01 0.017 0.025 ORD MID|Herpes_UL69; 0.0
13 fp_O Q04360 334 LACAMSLSKVILTK                HCCHHHHHHHHHHH c2-4 multi-selected 0.01 0.016 0.023 ORD MID|Herpes_UL69; 0.0
14 fp_O Q04360 336 CAMSLSKVILTKLKELA                   CHHHHHHHHHHHCCCCC c1cR-5 multi 0.01 0.016 0.035 ORD MID|Herpes_UL69; 0.0
15 fp_D Q04360 340 LSKVILTKLKELAPCFLP                    HHHHHHHHCCCCCCCCCC c4-4 multi-selected 0.013 0.019 0.047 boundary MID|Herpes_UL69; 0.0
16 fp_D Q04360 458 VRAILSPGTGSLGLFF                  CEEEECCCCCCCCEEE c1a-AT-4 multi-selected 0.071 0.04 0.082 boundary boundary|Herpes_UL69; 0.143
17 fp_D Q04360 462 LSPGTGSLGLFFVPG                 ECCCCCCCCEEECCC c1b-AT-4 multi 0.071 0.051 0.079 boundary boundary|Herpes_UL69; 0.286

*candidates: NES candidates and false positives annotated with "cand" and "fp", respectively;
                if the segment is located in the disordered or boundary region, flagged with "D"; if the segment is located in the ordered region, flagged with "O";
                if the segment's beta-strand content is over 0.5, flagged with "beta".
*sequence: Hydrophobic positions are colored in red. The positions with the experimental evidence is marked with '*' (mutation) and '+' (functional sequence in NESdb or sites in validNES).
                The positions with '.' are for the region annotated in the long (more than 25 residues) functional sequence or site.
*multi-pattern: the consensus pattern is unique or multiple within the region (if the start# difference is less than 5, the segments are considered to be the same region)
*diso: average DISOPRED3-predicted disorder propensity for the segment
*spotd: average SPOT-Disorder-predicted disorder propensity for the segment
*iup: average IUPRED2A-predicted disorder propensity for the segment
*loc_DISO: location of the segment with respect to the ordered/disordered regions
*loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
*beta: beta-strand content in the middle of the segment